LOCUS BC032112 2895 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens integrin alpha FG-GAP repeat containing 3, mRNA (cDNA
clone MGC:23152 IMAGE:4844625), complete cds.
ACCESSION BC032112
VERSION BC032112.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2895)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2895)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC032112.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: p Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14042969.
FEATURES Location/Qualifiers
source 1..2895
/db_xref="H-InvDB:HIT000041424"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23152 IMAGE:4844625"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2895
/gene="ITFG3"
/gene_synonym="DKFZP761D0211"
/gene_synonym="FLJ32603"
/gene_synonym="gene +108"
/gene_synonym="gs19"
/db_xref="GeneID:83986"
/db_xref="HGNC:HGNC:14163"
CDS 145..1803
/gene="ITFG3"
/gene_synonym="DKFZP761D0211"
/gene_synonym="FLJ32603"
/gene_synonym="gene +108"
/gene_synonym="gs19"
/codon_start=1
/product="integrin alpha FG-GAP repeat containing 3"
/protein_id="AAH32112.1"
/db_xref="GeneID:83986"
/db_xref="HGNC:HGNC:14163"
/translation="MLDHKDLEAEIHPLKNEERKSQENLGNPSKNEDNVKSAPPQSRL
SRCRAAAFFLSLFLCLFVVFVVSFVIPCPDRPASQRMWRIDYSAAVIYDFLAVDDING
DRIQDVLFLYKNTNSSNNFSRSCVDEGFSSPCTFAAAVSGANGSTLWERPVAQDVALV
ECAVPQPRGSEAPSACILVGRPSSFIAVNLFTGETLWNHSSSFSGNASILSPLLQVPD
VDGDGAPDLLVLTQEREEVSGHLYSGSTGHQIGLRGSLGVDGESGFLLHVTRTGAHYI
LFPCASSLCGCSVKGLYEKVTGSGGPFKSDPHWESMLNATTRRMLSHSSGAVRYLMHV
PGNAGADVLLVGSEAFVLLDGQELTPRWTPKAAHVLRKPIFGRYKPDTLAVAVENGTG
TDRQILFLDLGTGAVLCSLALPSLPGGPLSASLPTADHRSAFFFWGLHELGSTSETET
GEARHSLYMFHPTLPRVLLELANVSTHIVAFDAVLFEPSRHAAYILLTGPADSEAPGL
VSVIKHKVRDLVPSSRVVRLGEGGPDSDQAIRDRFSRLRYQSEA"
BASE COUNT 572 a 933 c 818 g 572 t
ORIGIN
1 ggcaggtcca cctgggcttg cgaaggcaca gattccccgt ccacagctca cgaccagatg
61 caccagcagg agtccacatc gaggacgtcc tccgggcact cccacgacca gtgaccagga
121 gttaaacttt gggatgtgcc cgtgatgttg gaccacaagg acttagaggc cgaaatccac
181 cccttgaaaa atgaagaaag aaaatcgcag gaaaatctgg gaaatccatc aaaaaatgag
241 gataacgtga aaagcgcgcc tccacagtcc cggctctccc ggtgccgagc ggcggcgttt
301 tttctttcat tgtttctctg cctttttgtg gtgttcgtcg tctcattcgt catcccgtgt
361 ccagaccggc cggcgtcaca gcgaatgtgg aggatagact acagtgccgc tgttatctat
421 gactttctgg ctgtggatga tataaacggg gacaggatcc aagatgttct ttttctttat
481 aaaaacacca acagcagcaa caatttcagc cgatcctgtg tggacgaagg cttttcctct
541 ccctgcacct ttgcagctgc tgtgtcgggg gccaacggca gcacgctctg ggagagacct
601 gtggcccaag acgtggccct cgtggagtgt gctgtgcccc agccaagagg cagtgaggca
661 ccttccgcct gcatcctggt gggcagaccc agttctttca ttgcagtcaa cttgttcaca
721 ggggaaaccc tgtggaacca cagcagcagc ttcagcggga atgcgtccat cctgagccct
781 ctgctgcagg tgcctgatgt ggacggcgat ggggccccag acctgctggt tctcacccag
841 gagcgggagg aggttagtgg ccacctctac tccggcagca ccgggcacca gattggcctc
901 agaggcagcc ttggtgtgga cggggaaagt ggcttcctcc ttcacgtcac caggacaggt
961 gcccactaca tcctctttcc ctgcgcaagc tccctctgcg gctgctctgt gaagggtctc
1021 tacgagaagg tgaccgggag cggcggcccg ttcaagagtg acccgcactg ggagagcatg
1081 ctcaatgcca ccacccgcag gatgctttcc cacagctctg gagcagtgcg ctacctgatg
1141 catgtcccag ggaacgccgg tgcagatgtg cttcttgtgg gctcagaggc cttcgtgctg
1201 ctggacgggc aggagctgac gcctcgctgg acacccaagg cagcccatgt cctgagaaaa
1261 cccatcttcg gccgctacaa accagacacc ttggctgtag ccgttgaaaa cggaactggc
1321 accgacagac agatcctgtt tctggacctt ggcactggag ccgtcctgtg tagcctagcc
1381 ctcccgagcc tccctggggg tccactgtcc gccagcctgc cgaccgcaga ccaccgctca
1441 gccttcttct tctggggcct ccacgagctg gggagcacca gcgagacgga gaccggggag
1501 gcccggcaca gcctgtacat gttccacccc accctgccgc gcgtgctgct ggagctggcc
1561 aatgtctcta cccacattgt cgcctttgac gccgtcctgt ttgagccaag ccgccacgcc
1621 gcctacatcc ttctgacagg cccggcagac tcagaggcac ccggcctggt ctctgtgatc
1681 aagcacaagg tgcgggacct tgtcccaagc agcagggtgg tccgcctggg tgagggtggg
1741 ccagacagtg accaagccat cagggaccgg ttctcccggc tgcggtacca gagtgaggcg
1801 tagaggcacg ccagccagag cctgtggaga gactccgcct gctgacacta aacgtcctgg
1861 gaagtgggcc cttccctggg tctctgcact gactccccca ctcctgaccc tggtgatggt
1921 cgccactggg cagcagcagc cttaccagtc ctccatgatc acacccaggg acctgcatgg
1981 gtgaggggac accctgggcc tctctcccgc ccagcatcct ccctgagtcc ccacacaggg
2041 cctcactctg caccccacca gggtcccgct cacaccaggc agccttcata gtggtctccc
2101 tggccacctt gggcagagct gggtcatgca gcaccccatc cttacccggt gccctctcct
2161 tgccagcttc tccccaggcc agagcggcca tcgcgtagaa agaaccaggg tgtccccggg
2221 acaggccgtc ccccacccca tcctgtagaa gtccattccc cttttccctc ctgtgctctg
2281 tcccccaagg agtcatggaa ctcagggtac tgggcctcaa cgggaacctg agacagctcc
2341 agcttcgcag cccttcccgg agctacaggg ggatcctcta gcatgggggg tgtgacttgg
2401 ttcctttgac caggtcctgt gaggaagcct ggagcaaggg tctcccccag caggatgggt
2461 ggggcctgct ctggagctga gcccgtggcc gctcacaggt gtccttagtg gtgttgcagc
2521 tgtctactgg ctgcatgtgc tgtgaatatc ccaaggaact ggctgtggaa tgcgtgtttg
2581 ggtcagtctg tgccctctca gtagacactg gagctgctct gtccctgaag aggccccgtg
2641 ccccaggcat ggcaagcgcc tgcctctccc cttccggtgc tcacacgccc acgccgtgcc
2701 acccgatgca ggactcacct ctgtgccttg ctgctcctga ggcccaaggg cagccatggt
2761 gctctgtact gctcgggccg cccaggtcac agagcctgag cttcgtagcc aaagcagcct
2821 gatgacccac ccaccaagga agaaagcaga ataaacattt ttgcactgcc tgaaaaaaaa
2881 aaaaaaaaaa aaaaa
//