LOCUS BC031896 1164 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cell death-inducing DFFA-like effector a, mRNA (cDNA
clone MGC:30089 IMAGE:4776542), complete cds.
ACCESSION BC031896
VERSION BC031896.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1164)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1164)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: e Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38158010.
FEATURES Location/Qualifiers
source 1..1164
/db_xref="H-InvDB:HIT000041387"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:30089 IMAGE:4776542"
/tissue_type="Skin, normal"
/clone_lib="NCI_CGAP_Skn3"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1164
/gene="CIDEA"
/gene_synonym="CIDE-A"
/db_xref="GeneID:1149"
/db_xref="HGNC:HGNC:1976"
/db_xref="MIM:604440"
CDS 29..790
/gene="CIDEA"
/gene_synonym="CIDE-A"
/codon_start=1
/product="cell death-inducing DFFA-like effector a"
/protein_id="AAH31896.1"
/db_xref="GeneID:1149"
/db_xref="HGNC:HGNC:1976"
/db_xref="MIM:604440"
/translation="MRGDRASGGPGNHNGSWAREGPRLGPSWKRGLWSPRGGPNRPAE
PSRPLTFMGSQTKRVLFTPLMHPARPFRVSNHDRSSRRGVMASSLQELISKTLDALVI
ATGLVTLVLEEDGTVVDTEEFFQTLGDNTHFMILEKGQKWMPGSQHVPTCSPPKRSGI
ARVTFDLYRLNPKDFIGCLNVKATMYEMYSVSYDIRCTGLKGLLRSLLRFLSYSAQVT
GQFLIYLGTYMLRVLDDKEERPSLRSQAKGRFTCG"
BASE COUNT 283 a 309 c 358 g 214 t
ORIGIN
1 cccaggaacc ccgagcaaag cttccgcgat gcgaggggac cgggcttctg ggggtcctgg
61 aaatcacaac gggagctggg cgcgggaggg gcccaggctt ggcccctcct ggaagcgcgg
121 gctctggtct ccgaggggag gccccaaccg tccggcggag ccctccaggc ccctgacatt
181 tatgggatca cagactaagc gagtcctgtt caccccgctc atgcatccag ctcgcccttt
241 ccgggtctcc aaccatgaca ggagcagccg gcgtggggtg atggcaagca gcctgcagga
301 gctcatcagc aagactctgg atgccctcgt catcgctacc ggactggtca ctctggtgct
361 ggaggaagat ggcaccgtgg tggacacaga agagttcttt cagaccttgg gagacaacac
421 gcatttcatg atcttggaaa aaggacagaa gtggatgccg ggcagccagc acgtccccac
481 ttgctcgccg ccgaagaggt cgggaatagc gagagtcacc ttcgacttgt acaggctgaa
541 ccccaaggac ttcatcggct gccttaacgt gaaggccacc atgtatgaga tgtactccgt
601 gtcctacgac atccggtgca cgggactcaa gggcctgctg aggagtctgc tgcggttcct
661 gtcctactcc gcccaggtga cgggacagtt tctcatctat ctgggcacat acatgctccg
721 ggtgctggat gacaaggaag agcggccatc cctccggtca caagccaagg gcaggttcac
781 gtgtggatag ggatgcaggc tgtcgccggc tcttgagcca aacactgtgt ttcgtttggc
841 tcaatgacga atgttgaaga tgcttttatg ttctgagcca catgcacttg gaggccgctg
901 gtcacgctgc tcaggagtgg tgcccagaaa aggaaagggc ttggtggtac atgaagtggg
961 ggcagtgggc agggtgccct gggggggagg catagagggc cctgggggtc atgggaagcg
1021 agcacgcagc aggcgtgccc aggagcgtgt gcatgtgtca gagccatttg gtccatcatc
1081 tcctgcaata aacccatcgc aagaatgacc ttcaaaaaaa aaaaaaaaaa aaaaaaaaaa
1141 aaaaaaaaaa aaaaaaaaaa aaaa
//