LOCUS BC031890 4030 bp mRNA linear HUM 04-AUG-2008 DEFINITION Homo sapiens FtsJ methyltransferase domain containing 2, mRNA (cDNA clone MGC:29890 IMAGE:4944457), complete cds. ACCESSION BC031890 VERSION BC031890.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4030) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4030) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 42 Row: i Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24307982. FEATURES Location/Qualifiers source 1..4030 /db_xref="H-InvDB:HIT000041386" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:29890 IMAGE:4944457" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..4030 /gene="FTSJD2" /db_xref="GeneID:23070" /db_xref="HGNC:HGNC:21077" CDS 148..2655 /gene="FTSJD2" /codon_start=1 /product="FtsJ methyltransferase domain containing 2" /protein_id="AAH31890.1" /db_xref="GeneID:23070" /db_xref="HGNC:HGNC:21077" /translation="MKRRTDPECTAPIKKQKKRVAELALSLSSTSDDEPPSSVSHGAK ASTTSLSGSDSETEGKQHSSDSFDDAFKADSLVEGTSSRYSMYNSVSQKLMAKMGFRE GEGLGKYSQGRKDIVEASSQKGRRGLGLTLRGFDQELNVDWRDEPEPSACEQVSWFPE CTTEIPDTQEMSDWMVVGKRKMIIEDETEFCGEELLHSVLQCKSVFDVLDGEEMRRAR TRANPYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPRDSYGKPLVKDREAELLYFADV CAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDGDG DITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMAL SIVRTGGHFICKTFDLFTPFSVGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLK VGIDDVRDYLFAVNIKLNQLRNTDSDVNLVVPLEVIKGDHEFTDYMIRSNESHCSLQI KALAKIHAFVQDTTLSEPRQAEIRKECLRLWGIPDQARVAPSSSDPKSKFFELIQGTE IDIFSYKPTLLTSKTLEKIRPVFDYRCMVSGSEQKFLIGLGKSQIYTWDGRQSDRWIK LDLKTELPRDTLLSVEIVHELKGEGKAQRKISAIHILDVLVLNGTDVREQHFNQRIQL AEKFVKAVSKPSRPDMNPIRVKEVYRLEEMEKIFVRLEMKIIKGSSGTPKLSYTGRDD RHFVPMGLYIVRTVNEPWTMGFSKSFKKKFFYNKKTKDSTFDLPADSIAPFHICYYGR LFWEWGDGIRVHDSQKPQDQDKLSKEDVLSFIQMHRA" BASE COUNT 930 a 1017 c 1121 g 962 t ORIGIN 1 gcgcgacggt gcggctggcg gacccgggct ggcttgtggg gaaacgaaac tgagggagga 61 ggcggcggct ctggcagcgg cggcgacagt gtcggcctga ccccccctcc gctccccggc 121 agctcgctct ctcccctcag cttaacgatg aagaggagaa ctgacccaga atgcactgcc 181 cccatcaaga aacagaaaaa aagagttgca gagcttgccc tgagcctcag ctccacgtcc 241 gatgatgaac ctccctcctc tgtcagtcat ggagcaaaag catctactac aagccttagt 301 gggtctgata gtgagaccga ggggaaacaa cacagctctg actcttttga cgatgcattc 361 aaagcagact ctcttgtgga aggaacttct tctcgctatt ccatgtataa tagcgtctcc 421 cagaagctta tggccaagat gggcttcagg gaaggtgaag gattgggtaa atacagccag 481 ggtcggaagg acatcgttga ggcttccagt cagaaaggtc gaagaggctt gggtctgaca 541 ctccggggct ttgaccagga gctgaacgtg gactggcgag atgagccaga gcccagtgct 601 tgtgagcagg tgtcatggtt tccagaatgt accactgaaa ttcctgacac tcaggaaatg 661 agcgattgga tggtggtggg aaagagaaag atgattattg aagatgaaac agagttttgt 721 ggggaagagc tgcttcacag tgtgttgcag tgtaagagcg tgtttgatgt cttggatggg 781 gaagagatgc ggcgagctcg gactcgggcc aatccctatg agatgatccg aggagtcttc 841 tttctaaaca gggcagcaat gaagatggct aacatggatt ttgtatttga tcgcatgttc 901 acaaatccgc gggactctta tgggaagcca ctggtgaagg accgggaagc tgagcttctg 961 tactttgctg atgtctgcgc aggcccaggt ggcttctcag agtatgtgct gtggaggaag 1021 aagtggcatg caaagggctt tggaatgact ttgaagggcc ctaatgactt caagctggag 1081 gacttctact ctgcttccag tgaactcttc gaaccctact atggtgaggg tgggattgat 1141 ggagatggag atatcacccg cccagagaac atctctgctt ttcggaattt tgtcctggat 1201 aacacagatc gcaagggtgt ccattttctg atggctgatg ggggtttctc ggtggagggg 1261 caggagaacc tgcaggagat cctcagcaag cagctgcttc tgtgtcagtt cctcatggcg 1321 ctgtccattg tccggacagg aggccacttc atctgtaaaa cctttgacct gttcacaccg 1381 tttagtgtgg ggcttgtcta cctgctgtac tgctgctttg aacgagtttg tctcttcaag 1441 cctattacca gccgtcctgc caactcagag aggtatgtgg tgtgcaaggg cctgaaggtg 1501 ggcatagatg atgttcggga ttacctcttc gcagtgaata ttaaactcaa tcagctgcgg 1561 aacacggatt ccgacgtcaa cttggtggtc cccctggagg tgatcaaggg agaccatgaa 1621 tttactgact acatgatacg gtccaatgag agccactgta gtctgcagat caaagctctg 1681 gcgaaaatcc atgcctttgt tcaagacacg acactgagtg agcctcgaca ggcagagata 1741 cggaaggagt gcctccgact ctgggggatc ccagaccagg ctcgtgtggc tccttcttcc 1801 tccgacccta aatcgaagtt ctttgagcta atccagggca ctgagattga catcttcagc 1861 tacaagccca cactgctcac ctctaaaacc ctggagaaga tccgccctgt gtttgactac 1921 cgctgcatgg tatctggcag tgagcagaag ttcctcatcg gcctggggaa atcccagatc 1981 tacacatggg atggccgcca gtcagaccgc tggatcaagc tagacctgaa gacagagctg 2041 ccccgggaca ctctgctatc tgtggaaatt gtgcatgagc tgaaagggga ggggaaggcc 2101 cagaggaaga tcagtgccat ccacatcctc gatgtccttg tgctgaatgg caccgacgtt 2161 cgggagcagc actttaacca gcgaattcag cttgccgaga aatttgtgaa agccgtttcc 2221 aagcctagtc ggcccgacat gaatcccatc agggtgaagg aggtgtacag actggaagag 2281 atggagaaga tttttgtcag gttggagatg aagatcatca agggctccag tggcacccca 2341 aagctcagct acacagggcg tgatgaccgg cactttgtac ccatgggcct ctacatcgtc 2401 aggacagtga atgagccctg gactatggga ttcagcaaaa gcttcaagaa gaagttcttc 2461 tacaacaaga aaaccaagga ctctactttt gacctccctg cagactccat tgccccattt 2521 cacatttgct actatggccg gctcttctgg gagtgggggg atggcattcg tgtgcatgac 2581 tcccagaagc cccaggacca ggacaagctg tccaaggagg acgtcctctc cttcatccag 2641 atgcacaggg cctaagagcc tcagaatgtg ccacccctgc agaatgccct gtcattcctg 2701 agatggggcc acctggggcc cacagtgctg gcttcttccc cctcttgaaa agggactggg 2761 gagcattgca cctggcatga ggagtgggtg gcctcctctc catcccctga agagctcagg 2821 cagggccctg cagagaacac tcatgttcct tctgggacac ctgcctggga actttcccct 2881 gccaggactc agcctgaagg agctgctcct gaggcaggta tgaggtcagt gcctagggca 2941 cgtgggactt atggaggaca tatcagagtg gcagagctgt gggctctgct gttctctcct 3001 gcatcctgta gactcacttt tctgagttcc atgcactgcc ctgagggtag ccatgccctt 3061 gctttgccca actttttatt gggccatccc tgagtgggtg gagacctgct gtcatgagct 3121 ggccaggaga acctgctata aaaaaatcaa ggttttgttt ctttgaactt actctgtttt 3181 gatgccaaat tggagaccat tttcttgtct ccttccccca ctcatcctgg ccttccctgg 3241 agttcttcct agcccagagc tctgacagtc cagcagggtg ggaaggaggg agtttgggca 3301 aactctcatc cctgatacca cattgagatc ctgggagccc tcttttcgta ctgagtatgg 3361 agttgtagag ccatcctagg tgccatcccc ttttggtcca aacattgggc agcgctagat 3421 ggcaggaagc agccttgaag acccgtcttt cccccacagc agcaggggcc ccagcagtaa 3481 caaagggtac ctccaggggt ttgggtagcg ctgccctctg gcagtcatgc accgctgtct 3541 gccatagccg ctctagggtc ttggcagaat tctgagcttg aagtgcagct cccttactac 3601 cctttccctt cctttttctt ccctaatagg aggtacaatc tgcttttgtt tgtcgttaag 3661 tggtcactcc catttccttt atcttggccg acaacacaga gaggaggggg agctgggcag 3721 tagcttgggg tgggggtggg cacctgtggt tgtttttaat gggaaatacc tctcagagat 3781 gttcatgcag gctccctagg gccccatccc agtgccaggc tggtttccat ggagataggg 3841 cactgaggct cccgtgaggt tggaatcgac ttcaccatgg gggtccttca gccagcatcc 3901 agctccccac ccccaggctg gcagtagcac tgctgagatg ctgtatttcc acccaattct 3961 gggtatatca gtgtgtcttg cagaatcttg gatcattaaa gataaacata tttttaaaaa 4021 aaaaaaaaaa //