LOCUS BC031890 4030 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens FtsJ methyltransferase domain containing 2, mRNA (cDNA
clone MGC:29890 IMAGE:4944457), complete cds.
ACCESSION BC031890
VERSION BC031890.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4030)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4030)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: i Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24307982.
FEATURES Location/Qualifiers
source 1..4030
/db_xref="H-InvDB:HIT000041386"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29890 IMAGE:4944457"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4030
/gene="FTSJD2"
/db_xref="GeneID:23070"
/db_xref="HGNC:HGNC:21077"
CDS 148..2655
/gene="FTSJD2"
/codon_start=1
/product="FtsJ methyltransferase domain containing 2"
/protein_id="AAH31890.1"
/db_xref="GeneID:23070"
/db_xref="HGNC:HGNC:21077"
/translation="MKRRTDPECTAPIKKQKKRVAELALSLSSTSDDEPPSSVSHGAK
ASTTSLSGSDSETEGKQHSSDSFDDAFKADSLVEGTSSRYSMYNSVSQKLMAKMGFRE
GEGLGKYSQGRKDIVEASSQKGRRGLGLTLRGFDQELNVDWRDEPEPSACEQVSWFPE
CTTEIPDTQEMSDWMVVGKRKMIIEDETEFCGEELLHSVLQCKSVFDVLDGEEMRRAR
TRANPYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPRDSYGKPLVKDREAELLYFADV
CAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDGDG
DITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMAL
SIVRTGGHFICKTFDLFTPFSVGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLK
VGIDDVRDYLFAVNIKLNQLRNTDSDVNLVVPLEVIKGDHEFTDYMIRSNESHCSLQI
KALAKIHAFVQDTTLSEPRQAEIRKECLRLWGIPDQARVAPSSSDPKSKFFELIQGTE
IDIFSYKPTLLTSKTLEKIRPVFDYRCMVSGSEQKFLIGLGKSQIYTWDGRQSDRWIK
LDLKTELPRDTLLSVEIVHELKGEGKAQRKISAIHILDVLVLNGTDVREQHFNQRIQL
AEKFVKAVSKPSRPDMNPIRVKEVYRLEEMEKIFVRLEMKIIKGSSGTPKLSYTGRDD
RHFVPMGLYIVRTVNEPWTMGFSKSFKKKFFYNKKTKDSTFDLPADSIAPFHICYYGR
LFWEWGDGIRVHDSQKPQDQDKLSKEDVLSFIQMHRA"
BASE COUNT 930 a 1017 c 1121 g 962 t
ORIGIN
1 gcgcgacggt gcggctggcg gacccgggct ggcttgtggg gaaacgaaac tgagggagga
61 ggcggcggct ctggcagcgg cggcgacagt gtcggcctga ccccccctcc gctccccggc
121 agctcgctct ctcccctcag cttaacgatg aagaggagaa ctgacccaga atgcactgcc
181 cccatcaaga aacagaaaaa aagagttgca gagcttgccc tgagcctcag ctccacgtcc
241 gatgatgaac ctccctcctc tgtcagtcat ggagcaaaag catctactac aagccttagt
301 gggtctgata gtgagaccga ggggaaacaa cacagctctg actcttttga cgatgcattc
361 aaagcagact ctcttgtgga aggaacttct tctcgctatt ccatgtataa tagcgtctcc
421 cagaagctta tggccaagat gggcttcagg gaaggtgaag gattgggtaa atacagccag
481 ggtcggaagg acatcgttga ggcttccagt cagaaaggtc gaagaggctt gggtctgaca
541 ctccggggct ttgaccagga gctgaacgtg gactggcgag atgagccaga gcccagtgct
601 tgtgagcagg tgtcatggtt tccagaatgt accactgaaa ttcctgacac tcaggaaatg
661 agcgattgga tggtggtggg aaagagaaag atgattattg aagatgaaac agagttttgt
721 ggggaagagc tgcttcacag tgtgttgcag tgtaagagcg tgtttgatgt cttggatggg
781 gaagagatgc ggcgagctcg gactcgggcc aatccctatg agatgatccg aggagtcttc
841 tttctaaaca gggcagcaat gaagatggct aacatggatt ttgtatttga tcgcatgttc
901 acaaatccgc gggactctta tgggaagcca ctggtgaagg accgggaagc tgagcttctg
961 tactttgctg atgtctgcgc aggcccaggt ggcttctcag agtatgtgct gtggaggaag
1021 aagtggcatg caaagggctt tggaatgact ttgaagggcc ctaatgactt caagctggag
1081 gacttctact ctgcttccag tgaactcttc gaaccctact atggtgaggg tgggattgat
1141 ggagatggag atatcacccg cccagagaac atctctgctt ttcggaattt tgtcctggat
1201 aacacagatc gcaagggtgt ccattttctg atggctgatg ggggtttctc ggtggagggg
1261 caggagaacc tgcaggagat cctcagcaag cagctgcttc tgtgtcagtt cctcatggcg
1321 ctgtccattg tccggacagg aggccacttc atctgtaaaa cctttgacct gttcacaccg
1381 tttagtgtgg ggcttgtcta cctgctgtac tgctgctttg aacgagtttg tctcttcaag
1441 cctattacca gccgtcctgc caactcagag aggtatgtgg tgtgcaaggg cctgaaggtg
1501 ggcatagatg atgttcggga ttacctcttc gcagtgaata ttaaactcaa tcagctgcgg
1561 aacacggatt ccgacgtcaa cttggtggtc cccctggagg tgatcaaggg agaccatgaa
1621 tttactgact acatgatacg gtccaatgag agccactgta gtctgcagat caaagctctg
1681 gcgaaaatcc atgcctttgt tcaagacacg acactgagtg agcctcgaca ggcagagata
1741 cggaaggagt gcctccgact ctgggggatc ccagaccagg ctcgtgtggc tccttcttcc
1801 tccgacccta aatcgaagtt ctttgagcta atccagggca ctgagattga catcttcagc
1861 tacaagccca cactgctcac ctctaaaacc ctggagaaga tccgccctgt gtttgactac
1921 cgctgcatgg tatctggcag tgagcagaag ttcctcatcg gcctggggaa atcccagatc
1981 tacacatggg atggccgcca gtcagaccgc tggatcaagc tagacctgaa gacagagctg
2041 ccccgggaca ctctgctatc tgtggaaatt gtgcatgagc tgaaagggga ggggaaggcc
2101 cagaggaaga tcagtgccat ccacatcctc gatgtccttg tgctgaatgg caccgacgtt
2161 cgggagcagc actttaacca gcgaattcag cttgccgaga aatttgtgaa agccgtttcc
2221 aagcctagtc ggcccgacat gaatcccatc agggtgaagg aggtgtacag actggaagag
2281 atggagaaga tttttgtcag gttggagatg aagatcatca agggctccag tggcacccca
2341 aagctcagct acacagggcg tgatgaccgg cactttgtac ccatgggcct ctacatcgtc
2401 aggacagtga atgagccctg gactatggga ttcagcaaaa gcttcaagaa gaagttcttc
2461 tacaacaaga aaaccaagga ctctactttt gacctccctg cagactccat tgccccattt
2521 cacatttgct actatggccg gctcttctgg gagtgggggg atggcattcg tgtgcatgac
2581 tcccagaagc cccaggacca ggacaagctg tccaaggagg acgtcctctc cttcatccag
2641 atgcacaggg cctaagagcc tcagaatgtg ccacccctgc agaatgccct gtcattcctg
2701 agatggggcc acctggggcc cacagtgctg gcttcttccc cctcttgaaa agggactggg
2761 gagcattgca cctggcatga ggagtgggtg gcctcctctc catcccctga agagctcagg
2821 cagggccctg cagagaacac tcatgttcct tctgggacac ctgcctggga actttcccct
2881 gccaggactc agcctgaagg agctgctcct gaggcaggta tgaggtcagt gcctagggca
2941 cgtgggactt atggaggaca tatcagagtg gcagagctgt gggctctgct gttctctcct
3001 gcatcctgta gactcacttt tctgagttcc atgcactgcc ctgagggtag ccatgccctt
3061 gctttgccca actttttatt gggccatccc tgagtgggtg gagacctgct gtcatgagct
3121 ggccaggaga acctgctata aaaaaatcaa ggttttgttt ctttgaactt actctgtttt
3181 gatgccaaat tggagaccat tttcttgtct ccttccccca ctcatcctgg ccttccctgg
3241 agttcttcct agcccagagc tctgacagtc cagcagggtg ggaaggaggg agtttgggca
3301 aactctcatc cctgatacca cattgagatc ctgggagccc tcttttcgta ctgagtatgg
3361 agttgtagag ccatcctagg tgccatcccc ttttggtcca aacattgggc agcgctagat
3421 ggcaggaagc agccttgaag acccgtcttt cccccacagc agcaggggcc ccagcagtaa
3481 caaagggtac ctccaggggt ttgggtagcg ctgccctctg gcagtcatgc accgctgtct
3541 gccatagccg ctctagggtc ttggcagaat tctgagcttg aagtgcagct cccttactac
3601 cctttccctt cctttttctt ccctaatagg aggtacaatc tgcttttgtt tgtcgttaag
3661 tggtcactcc catttccttt atcttggccg acaacacaga gaggaggggg agctgggcag
3721 tagcttgggg tgggggtggg cacctgtggt tgtttttaat gggaaatacc tctcagagat
3781 gttcatgcag gctccctagg gccccatccc agtgccaggc tggtttccat ggagataggg
3841 cactgaggct cccgtgaggt tggaatcgac ttcaccatgg gggtccttca gccagcatcc
3901 agctccccac ccccaggctg gcagtagcac tgctgagatg ctgtatttcc acccaattct
3961 gggtatatca gtgtgtcttg cagaatcttg gatcattaaa gataaacata tttttaaaaa
4021 aaaaaaaaaa
//