LOCUS       BC031837                3270 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens protocadherin beta 10, mRNA (cDNA clone MGC:24979
            IMAGE:4931995), complete cds.
ACCESSION   BC031837
VERSION     BC031837.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3270)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3270)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUN-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: David N. Louis, M.D.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 29 Row: n Column: 18
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 52486036.
FEATURES             Location/Qualifiers
     source          1..3270
                     /db_xref="H-InvDB:HIT000041380"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:24979 IMAGE:4931995"
                     /tissue_type="Brain, anaplastic oligodendroglioma with
                     1p/19q loss"
                     /clone_lib="NCI_CGAP_Brn67"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..3270
                     /gene="PCDHB10"
                     /gene_synonym="PCDH-BETA10"
                     /gene_synonym="PCHB10"
                     /db_xref="GeneID:56126"
                     /db_xref="HGNC:HGNC:8681"
                     /db_xref="MIM:606336"
     CDS             175..2577
                     /gene="PCDHB10"
                     /gene_synonym="PCDH-BETA10"
                     /gene_synonym="PCHB10"
                     /codon_start=1
                     /product="protocadherin beta 10"
                     /protein_id="AAH31837.1"
                     /db_xref="GeneID:56126"
                     /db_xref="HGNC:HGNC:8681"
                     /db_xref="MIM:606336"
                     /translation="MAVRELCFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSF
                     VVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPC
                     MLYFQILMDDPFQIYRAELRVRDINDHAPVFQDKETVLKISENTAEGTAFRLERAQDP
                     DGGLNGIQNYTISPNSFFHINISGGDEGMIYPELVLDKALDREEQGELSLTLTALDGG
                     SPSRSGTSTVRIVVLDVNDNAPQFAQALYETQAPENSPIGFLIVKVWAEDVDSGVNAE
                     VSYSFFDASENIRTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCRVL
                     VEVLDTNDNPPELIVSSFSNSVAENSPETPLAVFKINDRDSGENGKMVCYIQENLPFL
                     LKPSVENFYILITEGALDREIRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPA
                     FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINA
                     DNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRVLVLDANDNSPFVLYPLQ
                     NGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEV
                     RTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQPYLPLPEAAPAQAQ
                     AEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSVPEGPFPGHLVD
                     VRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEENSTFRNSFGFN
                     IQ"
BASE COUNT          838 a          786 c          796 g          850 t
ORIGIN      
        1 gaagacacgg acagatgaac ttaaaagaga agctttagct gccaaagatt gggaaaggga
       61 aaggacaaaa aagacccctg ggctacacgg cgtaggtgca gggtttccta ctgctgttct
      121 tttatgctgg gagctgtggc tgtaaccaac taggaaataa cgtatgcagc agctatggct
      181 gtcagagagt tgtgcttccc aagacaaagg caagtcctgt ttctttttct tttttgggga
      241 gtgtccttgg caggttctgg gtttggacgt tattcggtga ctgaggaaac agagaaagga
      301 tcctttgtgg tcaatctggc aaaggatctg ggactagcag agggggagct ggctgcaagg
      361 ggaaccaggg tggtttccga tgataacaaa caatacctgc tcctggattc acataccggg
      421 aatttgctca caaatgagaa actggaccga gagaagctgt gtggccctaa agagccctgt
      481 atgctgtatt tccaaatttt aatggatgat ccctttcaga tttaccgggc tgagctgaga
      541 gtcagggata taaatgatca cgcgccagta tttcaggaca aagaaacagt cttaaaaata
      601 tcagaaaata cagctgaagg gacagcattt agactagaaa gagcacagga tccagatgga
      661 ggacttaacg gtatccaaaa ctacacgatc agccccaact cttttttcca tattaacatt
      721 agtggcggtg atgaaggcat gatatatcca gagctagtgt tggacaaagc actggatcgg
      781 gaggagcagg gagagctcag cttaaccctc acagcgctgg atggtgggtc tccatccagg
      841 tctgggacct ctactgtacg catcgttgtc ttggacgtca atgacaatgc cccacagttt
      901 gcccaggctc tgtatgagac ccaggctcca gaaaacagcc ccattgggtt ccttattgtt
      961 aaggtatggg cagaagatgt agactctgga gtcaacgcgg aagtatccta ttcatttttt
     1021 gatgcctcag aaaatattcg aacaaccttt caaatcaatc ctttttctgg ggaaatcttt
     1081 ctcagagaat tgcttgatta tgagttagta aattcttaca aaataaatat acaggcaatg
     1141 gacggtggag gcctttctgc aagatgtagg gttttagtgg aagtattgga caccaatgac
     1201 aatccccctg aactgatcgt atcatcattt tccaactctg ttgctgagaa ttctcctgag
     1261 acgccgctgg ctgtttttaa gattaatgac agagactctg gagaaaatgg aaagatggtt
     1321 tgctacattc aagagaatct gccattccta ctaaaacctt ctgtggagaa tttttacatc
     1381 ctaattacag aaggcgcgct ggacagagag atcagagccg agtacaacat cactatcacc
     1441 gtcactgact tggggacacc caggctgaaa accgagcaca acataacggt cctggtctcc
     1501 gacgtcaatg acaacgcccc cgccttcacc caaacctcct acaccctgtt cgtccgcgag
     1561 aacaacagcc ccgccctgca catcggcagc gtcagcgcca cagacagaga ctcgggcacc
     1621 aacgcccagg tcacctactc gctgctgccg ccccaagacc cgcacctgcc cctcgcctcc
     1681 ctggtctcca tcaacgcgga caacggccac ctgttcgccc tcaggtcgct ggactacgag
     1741 gccctgcagg ctttcgagtt ccgcgtgggc gccacagacc gcggctcccc cgcgctgagc
     1801 agagaggcgc tggtgcgcgt gctggtgctg gacgccaacg acaactcgcc cttcgtgctg
     1861 tacccgctgc agaacggctc cgcgccctgc accgagctgg tgccccgggc ggccgagccg
     1921 ggctacctgg tgaccaaggt ggtggcggtg gacggcgact cgggccagaa cgcctggctg
     1981 tcgtaccagc tgctcaaggc cacggagccc gggctgttcg gtgtgtgggc gcacaatggg
     2041 gaggtgcgca ccgccaggct gctgagcgag cgcgacgcag ccaagcacag gctcgtggtg
     2101 cttgtcaagg acaatggcga gcctcctcgc tcggccaccg ccacgctgca cttgctcctg
     2161 gtggacggct tctcccagcc ctacctgcct ctcccggagg cggccccggc ccaggcccag
     2221 gccgaggccg acttgctcac cgtctacctg gtggtggcgt tggcctcggt gtcttcgctc
     2281 ttcctcctct cggtgctcct gttcgtggcg gtgcggctgt gcaggaggag cagggcggcc
     2341 tcggtgggtc gctgctcggt gcccgagggt ccttttccag ggcatctggt ggacgtgagg
     2401 ggcgctgaga ccctgtccca gagctaccag tatgaggtgt gtctgacggg aggccccggg
     2461 accagtgagt tcaagttctt gaaaccagtt atttcggata ttcaggcaca gggccctggg
     2521 aggaagggtg aagaaaattc caccttccga aatagctttg gatttaatat tcagtaaagt
     2581 ctgtttttag tttcatatac ttttggtgtg ttacatagcc atgtttctat tagtttactt
     2641 ttaaatctca aatttaagtt attatgcaac ttcaagcatt attttcaagt agtatacccc
     2701 tgtggtttta caatgtttca tcattttttt gcattaataa caactgggtt taatttaatg
     2761 agtatttttt tctaaatgat agtgttaagg ttttaattct ttccaactgc ccaaggaatt
     2821 aattactatt atatctcatt acagaaatct gaggttttga ttcatttcag agcttgcatc
     2881 tcatgattct aatcacttct gtctatagtg tacttgctct atttaagaag gcatatctac
     2941 atttccaaac tcattctaac attctatata ttcgtgtttg aaaaccatgt catttatttc
     3001 tacatcatgt atttaaaaag aaatatttct ctactactat gctcatgaca aaatgaaaca
     3061 aagcatattg tgagcaatac tgaacatcaa taataccctt agtttatata cttattattt
     3121 tatctttaag catgctactt ttacttggcc aatattttct tatgttaact tttgctgatg
     3181 tataaaacag actatgcctt ataattgaaa taaaattata atctgcctga aaatgaataa
     3241 aaataaaaca ttttgaaaaa aaaaaaaaaa
//