LOCUS BC031821 1819 bp mRNA linear HUM 27-APR-2005
DEFINITION Homo sapiens secernin 3, mRNA (cDNA clone IMAGE:4454137), partial
cds.
ACCESSION BC031821
VERSION BC031821.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1819)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1819)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: b Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38504670.
FEATURES Location/Qualifiers
source 1..1819
/db_xref="H-InvDB:HIT000041376"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4454137"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_89"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1819
/gene="SCRN3"
/gene_synonym="FLJ23142"
/gene_synonym="SES3"
/db_xref="GeneID:79634"
CDS <1..834
/gene="SCRN3"
/gene_synonym="FLJ23142"
/gene_synonym="SES3"
/codon_start=1
/product="SCRN3 protein"
/protein_id="AAH31821.2"
/db_xref="GeneID:79634"
/translation="MVFSYHNSFLIADRNEAWILETAGKYWAAEKVQEGVRNISNQLS
ITTKIAREHPDMRNYAKRKGWWDGKKEFDFAAAYSYLDTAKMMTSSGRYCEGYKLLNK
HKGNITFETMMEILRDKPSGINMEGEFLTTASMVSILPQDSSLPCIHFFTGTPDPERS
VFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALEVVNNNEE
KAKIMLDNMRKLEKELFREMESILQNKHLDVEKIVNLFPQCTKDEIQIYQSNLSVKVS
S"
BASE COUNT 643 a 286 c 324 g 566 t
ORIGIN
1 atggtattta gctatcacaa cagtttcctg atagctgata ggaatgaagc ctggattctg
61 gagactgcag ggaagtactg ggcagcagaa aaagtacaag agggagttcg taatatttct
121 aatcaacttt ccataacaac caagattgcc cgggaacacc cagacatgag aaactatgct
181 aagcggaaag gttggtggga tggtaaaaag gagtttgatt ttgctgcagc atattcctat
241 cttgacacag ccaagatgat gacttcatca ggcagatact gtgagggcta caagcttcta
301 aataagcaca aaggaaatat aacttttgaa acaatgatgg aaattcttcg agataaacca
361 agtggcatta atatggaggg agaattcctg accactgcaa gcatggtttc tattttacct
421 caagactcca gccttccttg cattcacttc tttacaggga ctcctgatcc tgagagatct
481 gtttttaagc ctttcatatt tgtgccacat atttcacaac tattggatac cagttcacca
541 acatttgaac ttgaagatct agttaaaaag aaatcacatt ttaagcctga cagaagacac
601 ccactctacc aaaaacatca acaggcattg gaagtagtaa ataataatga ggaaaaagcc
661 aaaataatgt tggacaacat gaggaaactg gagaaagaac tattcagaga gatggaatca
721 atccttcaaa acaagcatct tgatgtggag aaaattgtta atctctttcc tcagtgtaca
781 aaagatgaaa ttcaaattta tcagtcaaat ttatcagtca aagttagttc ttagtgatca
841 tatggtcagc taatattagt tcttagtgat cagtggtcag taatcttcaa agtcagaatc
901 tatcaccttg gtaaattata taaacctaac ttgagcagat ctgattattc ttggatagta
961 ttcaagtggt atcttgacta ttaaactacg tatagtgttg ctgaaataga aagaaaacag
1021 cattggaatt ggattcatgt atcgtgggat acaggtgtta tttcaggtga tgtacttgca
1081 ttattttctt tagccatagt aactttttgt cacaataact aagtattcaa ttatatataa
1141 agagtgaaac attaaaatga cgcatggatt tatatttatt ataattatgt agtaccctca
1201 aatcattttg tcagttacat caagaaagca gatttttctt tagtcatgaa aaatatctca
1261 agtggtaagt tgtttgtgct ttaggcaaac attaaccagc tctaacaaga aaaatgtcta
1321 gatttacaca ttgtcaatac agtatattag ttctgcaaat gcacttttgt taaactcaaa
1381 catgctcttt gtcaagactt ggctaaccag tgagcttgta gctctgatta tctagcattt
1441 ttagggtcat tctccttaat aggcttttat gttaataaga tatattttta gaagagcttg
1501 tttgggagat tagagaataa gataaaagaa ccaaaacctt aggatatact gtttctgggt
1561 ctgaaatctc tctcattgtt tacttctgtt cactcagtga aaacagaaac aagaatgagg
1621 tagtggcaat gaaatagaat tattagtata ttatgaacat tataacattt tgaacactat
1681 aatgcattat atattatgaa cttttatgaa ctttatacat gagtaatagc ttcctaaagt
1741 ttataaaaca ttgtttaggt tacataaaga ttaccaagta agactcaaaa ttgcaaatat
1801 aaacaaaaaa aaaaaaaaa
//