LOCUS BC031790 2281 bp mRNA linear HUM 25-JAN-2007
DEFINITION Homo sapiens protein phosphatase 2 (formerly 2A), regulatory
subunit B, beta isoform, mRNA (cDNA clone MGC:24888 IMAGE:4939981),
complete cds.
ACCESSION BC031790
VERSION BC031790.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2281)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2281)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: o Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32307116.
FEATURES Location/Qualifiers
source 1..2281
/db_xref="H-InvDB:HIT000041370"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24888 IMAGE:4939981"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2281
/gene="PPP2R2B"
/gene_synonym="PP2A-PR55B"
/gene_synonym="PR2AB-BETA"
/gene_synonym="PR2AB55-BETA"
/gene_synonym="PR2APR55-BETA"
/gene_synonym="PR52B"
/gene_synonym="PR55-BETA"
/db_xref="GeneID:5521"
/db_xref="HGNC:HGNC:9305"
/db_xref="MIM:604325"
CDS 488..1819
/gene="PPP2R2B"
/gene_synonym="PP2A-PR55B"
/gene_synonym="PR2AB-BETA"
/gene_synonym="PR2AB55-BETA"
/gene_synonym="PR2APR55-BETA"
/gene_synonym="PR52B"
/gene_synonym="PR55-BETA"
/codon_start=1
/product="protein phosphatase 2 (formerly 2A), regulatory
subunit B, beta isoform"
/protein_id="AAH31790.1"
/db_xref="GeneID:5521"
/db_xref="HGNC:HGNC:9305"
/db_xref="MIM:604325"
/translation="MEEDIDTRKINNSFLRDHSYATEADIISTVEFNHTGELLATGDK
GGRVVIFQREQESKNQVHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQN
AAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEEGRLRDPATITTLRVPVLRPMDLMV
EATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPANM
EELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRASALCDRHTKFFEEPEDPSNRSF
FSEIISSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYE
NDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRK
VCVGGKRRKDEISVDSLDFSKKILHTAWHPSENIIAVAATNNLYIFQDKVN"
BASE COUNT 677 a 510 c 513 g 581 t
ORIGIN
1 gcaaatcctg ctcagaggag cttcagccaa tgaagaggct atatcccggc ttgcttgggg
61 gcttctgagt ttgagctgca tgcagaaatg taaggcagtg cttcctggcg ctgatggcaa
121 aatgggaccc atctccagtt attcctcggg caccccagct ttgcaaatct gggaaagaac
181 ctacataaac atattggtga tgtagccagc ttaaaaggcc gagagaatcc ttatggattc
241 aggagactgt ttttttattt agatttttat tttttatttg gaagatgaaa tgcttctctc
301 gttacctgcc ttacatcttc agacctccga acaccatcct ttcttccagc tgccacacag
361 aaggctcgga ccatggtgca gtcccactgg ctcccctgcc cccctctcct gtgagactgg
421 ctgcggggag ggatcatgga tacttgtctg ccggcttctg gttcccacgc aagtaagcct
481 gctgtcaatg gaggaggaca ttgatacccg caaaatcaac aacagtttcc tgcgcgacca
541 cagctatgcg accgaagctg acattatctc tacggtagaa ttcaaccaca cgggagaatt
601 actagcgaca ggggacaagg ggggtcgggt tgtaatattt caacgagagc aggagagtaa
661 aaatcaggtt catcgtaggg gtgaatacaa tgtttacagc acattccaga gccatgaacc
721 cgagttcgat tacctgaaga gtttagaaat agaagaaaaa atcaataaaa taagatggct
781 cccccagcag aatgcagctt actttcttct gtctactaat gataaaactg tgaagctgtg
841 gaaagtcagc gagcgtgata agaggccaga aggctacaat ctgaaagatg aggagggccg
901 gctccgggat cctgccacca tcacaaccct gcgggtgcct gtcctgagac ccatggacct
961 gatggtggag gccaccccac gaagagtatt tgccaacgca cacacatatc acatcaactc
1021 catatctgtc aacagcgact atgaaaccta catgtccgct gatgacctga ggattaacct
1081 atggaacttt gaaataacca atcaaagttt taatattgtg gacattaagc cagccaacat
1141 ggaggagctc acggaggtga tcacagcagc cgagttccac ccccatcatt gcaacacctt
1201 cgtgtacagc agcagcaaag ggacaatccg gctgtgtgac atgcgggcat ctgccctgtg
1261 tgacaggcac accaaatttt ttgaagagcc ggaagatcca agcaacagat catttttctc
1321 tgaaattatc tcttcgattt cggatgtgaa gttcagccac agtgggaggt atatcatgac
1381 cagggactac ttgaccgtca aagtctggga tctcaacatg gaaaaccgcc ccatcgagac
1441 ttaccaggtt catgactacc tccgcagcaa gctgtgttcc ctctatgaaa atgactgcat
1501 ttttgataaa tttgagtgtg tgtggaatgg gtcagacagt gtcatcatga caggctccta
1561 caacaacttc ttcaggatgt tcgacagaaa caccaagcgt gatgtgaccc ttgaggcttc
1621 gagggaaaac agcaagcccc gggctatcct caaaccccga aaagtgtgtg tggggggcaa
1681 gcggagaaaa gacgagatca gtgtcgacag tctggacttt agcaaaaaga tcttgcatac
1741 agcttggcat ccttcagaaa atattatagc agtggcggct acaaataacc tatatatatt
1801 ccaggacaag gttaactagg tggacaagtt attacttaat aatctcacat actgaatact
1861 agtcaaacaa gtttttaaat gtttctttgg gtcttcattt gatgcattga ctttaatttc
1921 cctatacagg aaatgattgg aatagaatta aaaggagtcc aacattccca gctccccagt
1981 tctaagaaac ttttgtcaaa cccaataggt ttgggacact tctgtttaga attgaaagct
2041 gccagctaac agtaattctt ccatagttga cttgaacttc tgatgctttt attgcccagt
2101 tttctctggt gggtccagtg ttttgttcct aggtgtctgc tgcgataaaa tgaggttgtc
2161 tgtagtattt aaggagaaaa gagataagtt ttttttaatt aagcaattcc atttgattga
2221 aaaaaatcaa caaaaaataa acaccgttta ctcttaaaaa aaaaaaaaaa aaaaaaaaaa
2281 a
//