LOCUS BC031662 2844 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens CHIA-like pseudogene, mRNA (cDNA clone IMAGE:5176731).
ACCESSION BC031662
VERSION BC031662.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2844)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2844)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC031662.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: n Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61966690
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2844
/db_xref="H-InvDB:HIT000092419"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5176731"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 849 a 663 c 626 g 706 t
ORIGIN
1 gtctgctcct tgtgctgaca gctgaaatag gctctgccta ccagctgaca tgttacttca
61 ccaactgggc ccagaaccag ccaggcctgg ggtgcttcaa gcctgatgac atcgacccct
121 gcctctgtac ccacttgatc tacgcctttg ctggaatgca gaacaacgag atcaccacca
181 tcgaatggga tgacatgact ctctaccaag ctttcaatgg cctgaaaaac aagtaaatga
241 cggaaaacct gagtttcaaa tcttttaacc tttaaggaca gtttaaacaa gatcttccac
301 agcagacttc aggctgaaat tccaaacagg ccaacaagca ggtaaattca gctttcttat
361 tatttcaagt gcaagaatga ctctaatttt aaggggaatg gctggctcac agaagctagc
421 tgctaactaa agcccagctc agttgccaag ggaagcttat aagtccaact actggtggac
481 tcagttgaga acaatcttcc acttagaagc aatccaaagc tggcattgat aaagcattca
541 gtctccttgg tcaggagatt cactcctagg gaaataattg gaactgtgga gacattgggg
601 tgcagcaaac caacatggca catgtatacc tatgtaacaa acctgcacat tgtgcacatg
661 taccctggaa cttaaagtat atttaaaaaa aaaactgtgg agacattgaa acataccaat
721 catagtcacc tactccaaca ttcataagta ggaaataagg ataagaacaa agataaacca
781 ggatgagagg ctgcatgaca ctttcctggc ttcttgctca ctattgcagc taaatgttga
841 aatggcttcc ctttcttttc atttgttctg gtaaaacact ttgtttcttt tccctcagaa
901 atagtcaact gaaaactctc ttggctattg gtggctggaa ctttggcact gctcctttca
961 ctgccatggt ttccactcct gagaaccacc agactttcat caactcagtc atcaaattcc
1021 tgcgccagta tgagtttgac gggctggact ttgactggga gtaccccggc tctcgtgtga
1081 gccctcctca ggacaagcat ctcttcactg tcctggtgca ggaaatgcgt gaagcttttg
1141 agcaggaggc caagcacatt aataagccca ggctgatggt cactgctgca gtagctgctg
1201 gcatctccaa catccagtct ggctatgaga tcccccaact gtcacagtac ccggactaca
1261 tccatgtcat gacctatgac ctccatggct cctgggaggg ctacactgga gagaacagcc
1321 ccctctacaa atacccgact gacactggca gcaacgccta cctcaatgtg gattatgtca
1381 tgaactactg gaaggacaac agggccccag ctgagaagct catgttggat tcccagccta
1441 tggacactcc ttccttctga gcaacccctc caaccatgga attgatgccc ctaccactgg
1501 tcctggccct gctggaccct ataccaggca gtctgggttc tgggcctact atgagatctg
1561 taccttcctg aagaatggag ctactgaagt atgggaggct tctgaggatg ttccctatgc
1621 ctacaaagga aatgagtggc ttggatacga taacaccaag agtttccaaa tcaaggcaga
1681 ttggctaaag aagaacaact ttggaggtgc catggtctgg gccattgacc tggatgattt
1741 cacaggcact ttctgcaacc aaggaaaatt ccctctgatc accaccctga aggatgctct
1801 gggcctgcag agtacaagtg agttagggag tgagaaggga cactaagcct cagacttaag
1861 agaaattcca aaggttcctt ggaagtcatg gagctgttgc acaagtaatt gtctgacatt
1921 gtccattcct atctggtaac aattgattaa tggtgggaag aacaaacagg actcttcacc
1981 atttcttcct tccttcattc atttcacaag aaatttattg aacatctatt acatatacag
2041 tgctctgtag gtaccacagg tgatctaaat gcataaatat ccatatctac tctatggaaa
2101 tttacaatct agtgagagaa attggattta caaaaactgc aaagctagac aacaatacag
2161 aagatattat gtgatactgt gccccctaaa agaataagta accttcttgt gagttcatga
2221 taatgaaaaa tttcaatcag taagatgtaa ggaggaaaaa atgcactgtg acttgaagga
2281 tgaggaagga gttggtaagc aaaggggtga gtggagcagg aaggatatat cagatcagaa
2341 gactgaaata tgtggagaca tagaaggagg agccaagaac aaaatccagg tactagctct
2401 cacacatcag gtatcactgg ctaaaagcaa ggaggttcag gatttgtttt cttttttctt
2461 ctcaggttgc aaagctccag cccaacccat tgctcccatt gccgaggcaa acatcacatg
2521 cggtgtcagc cacagtggta gctttgaggg ccgctctggc aggagctctg ggggcagccc
2581 cagaggtagt ggattctgtg ctgacagggc cagtggcctg taccctgacc ccactgacaa
2641 gaatgcctcc tacagttgtg tgaatggaaa gactttcact cagcactgcc agcctggtgg
2701 tgtctttgat accttctgct cctgctgcag ctggtgataa catttttcag atatcacctc
2761 acccagcctc agaagttgtt gtgcaataaa aggttgagca ttaaaaaaaa aaaaaaaaaa
2821 aaaaaaaaaa aaaaaaaaaa aaag
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