LOCUS BC031654 1599 bp mRNA linear HUM 06-DEC-2004
DEFINITION Homo sapiens family with sequence similarity 53, member B, mRNA
(cDNA clone MGC:34356 IMAGE:5174078), complete cds.
ACCESSION BC031654
VERSION BC031654.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1599)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1599)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: j Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47078280.
FEATURES Location/Qualifiers
source 1..1599
/db_xref="H-InvDB:HIT000041354"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34356 IMAGE:5174078"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1599
/gene="FAM53B"
/gene_synonym="bA12J10.2"
/gene_synonym="KIAA0140"
/db_xref="GeneID:9679"
CDS 432..1349
/gene="FAM53B"
/gene_synonym="bA12J10.2"
/gene_synonym="KIAA0140"
/codon_start=1
/product="FAM53B protein"
/protein_id="AAH31654.1"
/db_xref="GeneID:9679"
/translation="MVMVLSESLSTRGADSIACGTFSRELHTPKKMSQGPTLFSCGIM
ENDRWRDLDRKCPLQIDQPSTSIWECLPEKDSSLWHREAVTACAVTSLIKDLSISDHN
GNPSAPPSKRQCRSLSFSDEMSSCRTSWRPLGSKVWTPVEKRRCYSGGSVQRYSNGFS
TMQRSSSFSLPSRANVLSSPCDQAGLHHRFGGQPCQGVPGSAPCGQAGDTWSPDLHPV
GGGRLDLQRSLSCSHEQFSFVEYCPPSANSTPASTPELARRSSGLSRSRSQPCVLNDK
KVGVKRRRPEEVQEQRPSLDLAKMAQIAP"
BASE COUNT 390 a 476 c 444 g 289 t
ORIGIN
1 cacgcagccg cggtctggcg gctccgcggc ggcggcgggt gcgggcggcc tggccggtgc
61 cggttaaagg gacgagttgc aaacacttca ggaagtgaca agtcgatttc ctcctccccg
121 ggagtcgctc gtacaaagcg ctcggcgccg gcaggcgagc gtgcgcgcgg cggacgcgcg
181 gcgggcaccc cggacgactt ggcgagcgct ggcggtgacg gcgcggggtc cgcgcccgga
241 gcgccccgcc gcgcacagga gttgaccaca tttggccatt tcccagaagg gccccacccc
301 aagggtgagt ggccaatggg gagctgtttc tgctgacatc aattccccag gaggtactca
361 ccccaagtct gcccaagtga agatggctga tacccaccct gggatggagc ccagcgcctg
421 aggcccttat catggtgatg gtcctaagtg aaagcctcag cacccgggga gctgactcca
481 ttgcatgtgg gaccttcagc cgtgaactgc acacgccaaa gaagatgagt caaggaccta
541 cacttttctc ttgtggaatt atggaaaatg acagatggcg agacctggac aggaaatgcc
601 ctcttcagat tgaccaaccg agcaccagca tctgggaatg cctgcctgaa aaggacagct
661 cactatggca ccgggaggca gtgaccgcct gcgctgtgac cagtctgatc aaagacctca
721 gcatcagcga ccacaacggg aacccctcag caccccctag caagcgccag tgccgctcac
781 tgtccttctc cgatgagatg tccagttgcc ggacatcatg gaggcccttg ggctccaaag
841 tctggactcc cgtggaaaag agacgctgct acagcggggg cagcgtccag cgctattcca
901 acggcttcag caccatgcag aggagttcca gcttcagcct cccttcccgg gccaacgtgc
961 tctcctcacc ctgcgaccag gcaggactcc accaccgatt tggagggcag ccctgccaag
1021 gggtgccagg ctcagccccg tgtggacagg caggtgacac ctggagccct gacctgcacc
1081 ccgtgggagg aggccggctg gacctgcagc ggtccctctc ttgctcacat gagcagtttt
1141 cctttgtgga atactgtcct ccctcagcca acagcacacc tgcctcaaca ccagagctgg
1201 cgagacgctc cagcggcctt tcccgcagcc gctcccagcc gtgtgtcctt aacgacaaga
1261 aggtcggtgt taaaaggcgg cgccctgaag aagtgcaaga gcagaggcct tctctagacc
1321 ttgccaagat ggcacagata gccccatgag gaaggcacat cgttatccat tttacaggcg
1381 gtggctgagt cttagaggaa gcagtccagt gaaaccagaa ctcaagccac atatataatt
1441 taaaattcct agtagccagt tattaagaga agaaagtgaa atgactttga atagtatatt
1501 taacccagta tttccaaaat actatcattt ccacatgtca tcgatgtaag taaatcatga
1561 atgccctaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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