LOCUS BC031642 1792 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens TBC1 domain family, member 19, mRNA (cDNA clone
MGC:34295 IMAGE:5175317), complete cds.
ACCESSION BC031642
VERSION BC031642.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1792)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1792)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: l Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8922855.
FEATURES Location/Qualifiers
source 1..1792
/db_xref="H-InvDB:HIT000041346"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34295 IMAGE:5175317"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1792
/gene="TBC1D19"
/gene_synonym="FLJ11082"
/db_xref="GeneID:55296"
/db_xref="HGNC:HGNC:25624"
CDS 67..1647
/gene="TBC1D19"
/gene_synonym="FLJ11082"
/codon_start=1
/product="TBC1 domain family, member 19"
/protein_id="AAH31642.1"
/db_xref="GeneID:55296"
/db_xref="HGNC:HGNC:25624"
/translation="MLQEESDLSLIIAQIVQKLKGSNLYSQLERQAWASLQRPEIKLE
SLKEDIKEFFKISGWEKKLQNAVYSELSVFPLPSHPAAPPEHLKEPLVYMRKAQGSWE
KRILKSLNSMCTELSIPLARKRPVGEQKELLNKWNEMGTDEPDLSLFRPVYAPKDFLE
VLINLRNPNYENGDSLSFRTHLGLIQVPLKVKDIPELKECFVELGLNIGQLGIDDSTQ
VPPELFENEHVRIGQKVLAEQDSAAAQQYIRQGSPTALRAELWALILNISSQPEDVLY
YEQLKTNVIQHDLLVDSLIYKDVKLTASNDDYYFVFEDYLYQVLLCFSRDTSVLSHFA
FNSASPPKSYIRGKLGLEEYAVFYPPNGVIPFHGFSMYVAPLCFLYHEPSKLYQIFRE
MYVRFFFRLHSISSHPSGIVSLCLLFETLLQTYLPQLFYHLREIGAQPLRISFKWMVR
AFSGYLATDQLLLLWDRILGYNSLEILAVLAAAVFAFRAVNLMEVTSLAAAEAVLADL
FTLKVMPLLQIFLFATVT"
BASE COUNT 512 a 364 c 365 g 551 t
ORIGIN
1 cccggtagcc cgttcgctcc gcgccggcgg cctgtccccg cggcttggcg ggctagggca
61 ggggaaatgt tgcaggagga gtcggacctc tctctcatta ttgcccagat agtccaaaag
121 ctcaagggct ccaatttgta ctctcagctg gaacggcagg cctgggccag tcttcagaga
181 cctgagatta aacttgaatc actgaaagaa gatattaagg aattctttaa aatatcaggt
241 tgggagaaga aacttcagaa tgctgtttat agtgaactga gtgtgtttcc tttacctagt
301 catcctgctg cacctcctga acatcttaaa gaacctttgg tatacatgag gaaagcacag
361 ggaagttggg aaaaaagaat tttgaagagt ttaaatagta tgtgcactga actgagtatc
421 ccactggcac gaaagaggcc agttggagaa cagaaagaac ttcttaataa atggaatgaa
481 atgggaactg atgaaccaga tttaagcctt ttcagacctg tttatgcacc taaggatttt
541 cttgaggtat taattaatct tcgcaaccca aattatgaaa acggtgattc tcttagtttc
601 aggactcatt tgggtttaat tcaagttcca ctgaaagtaa aagacatccc tgaattgaaa
661 gaatgctttg tggaacttgg cttaaatata ggacaactgg gtatagatga ttctacacaa
721 gtgcctcctg aactttttga aaatgagcat gtacgtattg ggcaaaaagt tctagcagaa
781 caagatagtg ctgctgctca acagtacatc agacaaggaa gtcccacggc actgagagct
841 gaattgtggg ctctcatttt gaatatttcc agccaacctg aggatgtctt gtattatgag
901 cagcttaaga ccaatgtgat acaacatgac cttttggtgg acagtctaat ctataaagat
961 gtgaagttga cagcaagcaa tgatgattat tattttgtat ttgaagatta tttatatcag
1021 gtattacttt gtttttcccg ggatacatct gtgttgagtc actttgcatt caacagtgcc
1081 tcgccaccaa aatcatacat aagaggaaaa ctaggactgg aagaatatgc tgtcttttac
1141 ccaccaaatg gtgttatccc ttttcatgga ttttcaatgt atgttgcacc actttgtttt
1201 ctataccatg aaccttccaa attgtatcag atattccgtg agatgtatgt gcgttttttc
1261 ttcagactcc attccatctc ttctcatcct tctggtattg tgtcactctg tctgctgttt
1321 gaaactcttc ttcaaactta tcttccccaa ctcttttatc atctacgaga aattggggct
1381 caaccacttc gcatatcatt taagtggatg gttcgagctt tctctggata cttagctaca
1441 gatcagctct tgcttttatg ggatagaatc ctaggataca actctctgga aattcttgct
1501 gtgctggcag ctgccgtgtt tgctttccga gcagtgaacc tgatggaggt gacatcactg
1561 gctgcagctg aagcagttct tgctgacctt tttactttaa aagttatgcc tcttcttcag
1621 atttttctgt ttgctactgt cacctgatct tcttcacagt cactggcaac acatttagtt
1681 tttcattaga aacaaatcat gaactatgca aactctgcat aaaaccaaaa tgaaactttg
1741 catataagcc aataaagatc atgttccctc ttcagttaaa aaaaaaaaaa aa
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