LOCUS BC031600 1613 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens lipocalin 12, mRNA (cDNA clone IMAGE:5174789), with
apparent retained intron.
ACCESSION BC031600
VERSION BC031600.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1613)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1613)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: k Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31341771
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1613
/db_xref="H-InvDB:HIT000259031"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5174789"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 339 a 497 c 486 g 291 t
ORIGIN
1 ccagcgccca ggaccgtgtc tgggaaaagg tctttgcccg gagagtggga agagagaggg
61 gagggtgagc agaggacagg ccgggagttt tccgggaacg gaggaagagc agtggaggag
121 atgagatctc agtcttgccc aggctggagt ccagtggcac aatcatagct tactgcaggc
181 tcaaactcct gggctaaagc aatcctccca cctcagcctc tcaagtagct gggaccacag
241 ctgccaggat gaggctgctg tgtggcctgt ggctgtggct ctccttgctg aaagtcctgc
301 aggcccagac cccaaccccc ctgccactcc cgcccccgat gcagagcttc caaggaaacc
361 agttccaggg ggaatggttc gtcctgggcc tggcgggcaa cagcttcagg ccggagcaca
421 gggcgctgct gaacgctttc accgcaactt ttgagctaag tgatgatggc cgctttgagg
481 tgtggaatgc gatgactcgg tgagtggctg tccctgccgt tccaagcggg tgaggaggat
541 cccgggcctg ggtcccagcc gccagtggct caggtgcgcc atgggccccg tcccagcaca
601 ggcagcttca tgactctgcc tgccaatgac caaacccagc tggggagtat acaaaaaagt
661 gtgggcagct gggcgcgctg gctcacacct gtaatcctag cacttcgggg gccgggtgcg
721 ctggctcaca cctgtaatcc cagcacttcc ggggccgggc gcgctggctc acacctgtaa
781 tcccaggact tcaggggccg ggcgcgctgg ctcacacctg taatcctagc actttggggg
841 ccgggcgcgg tggcgcacac ctgtaatccc agcactttgg gggccgggcg cagtggcgca
901 cacctgtaat cccagtactt caggaggcag aggcagaagg atcacttgaa ctcaggagtt
961 tgagaccagc ctgagcaaca tagttagaca ccatctccac tcatgacgct tggccactcc
1021 cgccgtgggt ccctctgaat aagtggctga aatctcctga ggggcccacc tcagcatgga
1081 cctgccagct tccggagcct tccgcctcca cctgtcccct cctacagagg ccagcactgt
1141 gacacatggt cttatgtgct gataccggca gcccagcctg ggcagttcac tgtggaccac
1201 ggtgtggaca cacgagcagg ctggccgtcc tcaggatcag cctgctgggc aggagctggt
1261 tgctgcctcc cgggacgctg gaccagttca tctgcctggg cagagctcag ggcctctcgg
1321 atgacaacat tgtcttccca gatgtgactg gaggtgccct ggacctcagc agcctgccct
1381 gggtggcagc cccagcctga ccactcagac agccgcggcc cccaaggcct gactcttctt
1441 gtgggagggc gaggctggtc accccaggcc agcgtctgtt gaaggatgaa gcagctcctg
1501 tccggcccag ccctgcctca cagctgtgcg agctctgccc tcctcagctc tcaaacctga
1561 ataaatgcac caagcccaga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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