LOCUS BC031573 3177 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens neuronal guanine nucleotide exchange factor, mRNA (cDNA clone MGC:35393 IMAGE:5186132), complete cds. ACCESSION BC031573 VERSION BC031573.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3177) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3177) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 50 Row: f Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 29789101. FEATURES Location/Qualifiers source 1..3177 /db_xref="H-InvDB:HIT000041317" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:35393 IMAGE:5186132" /tissue_type="Colon, Kidney, Stomach, adult, whole pooled" /clone_lib="NIH_MGC_116" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3177 /gene="NGEF" /gene_synonym="EPHEXIN" /db_xref="GeneID:25791" /db_xref="HGNC:HGNC:7807" /db_xref="MIM:605991" CDS 236..2368 /gene="NGEF" /gene_synonym="EPHEXIN" /codon_start=1 /product="neuronal guanine nucleotide exchange factor" /protein_id="AAH31573.1" /db_xref="GeneID:25791" /db_xref="HGNC:HGNC:7807" /db_xref="MIM:605991" /translation="METRESEDLEKTRRKSASDQWNTDNEPAKVKPELLPEKEETSQA DQDIQDKEPHCHIPIKRNSIFNRSIRRKSKAKARDNPERNASCLADSQDNGKSVNEPL TLNIPWSRTPPCRTAMQTDPGAQEMSESSSTPGNGATPEEWPALADSPTTLTEALRMI HPIPADSWRNLIEQIGLLYQEYRDKSTLQEIETRRQQDAEIEDNTNGSPASEDTPEEE EEEEEEEEPASPPERKTLPQICLLSNPHSRFNLWQDLPEIRSSGVLEILQPEEIKLQE AMFELVTSEASYYKSLNLLVSHFMENERIRKILHPSEAHILFSNVLDVLAVSERFLLE LEHRMEENIVISDVCDIVYRYAADHFSVYITYVSNQTYQERTYKQLLQEKAAFRELIA QLELDPKCRGLPFSSFLILPFQRITRLKLLVQNILKRVEERSERECTALDAHKELEMV VKACNEGVRKMSRTEQMISIQKKMEFKIKSVPIISHSRWLLKQGELQQMSGPKTSRTL RTKKLFHEIYLFLFNDLLVICRQIPGDKYQVFDSAPRGLLRVEELEDQGQTLANVFIL RLLENADDREATYMLKASSQSEMKRWMTSLAPNRRTKFVSFTSRLLDCPQVQCVHPYV AQQPDELTLELADILNILDKTDDGWIFGERLHDQERGWFPSSMTEEILNPKIRSQNLK ECFRVHKMDDPQRSQNKDRRKLGSRNRQ" BASE COUNT 795 a 911 c 891 g 580 t ORIGIN 1 caggacgaag tttttggctg tgggctctct gggacagagt ggagcgcctg tggatttagc 61 cggggacaca ccatcctgct cgcaggtgcc tggacaggac aggggacgag ggaggaacac 121 tctctgagga agcccaactc ctatgagctc ctctctggca gcactcaaac cagtgaagct 181 tgggaaagtc attgacctcc agtcgttctg ctgagaaaca tctggctcta tttccatgga 241 gaccagggaa tctgaagatt tggaaaagac ccggaggaaa tcagcaagtg atcaatggaa 301 cactgataat gaaccagcca aggtgaaacc tgagttactc ccagaaaaag aggagacttc 361 tcaagctgac caggatatcc aagacaaaga gcctcattgc cacatcccaa ttaagagaaa 421 ttccatcttc aatcgctcca taagacgcaa aagcaaagcc aaggccagag acaaccccga 481 acggaacgcc agctgcctgg cagattcaca ggacaatgga aaatctgtaa atgagcccct 541 gaccttgaat atcccctgga gcagaacgcc tccttgcaga acagcaatgc agacagaccc 601 aggagcccag gaaatgagtg agtcgtcctc caccccggga aatggggcca cgcccgagga 661 gtggccggcc ctggccgaca gccccaccac gctcaccgag gccctgcgga tgatccaccc 721 cattcccgcc gactcctgga gaaacctcat tgaacaaata gggctcctgt atcaggaata 781 ccgagataaa tcgactctcc aagaaatcga aaccaggagg caacaggatg cagaaataga 841 agacaatacc aatgggtccc cggccagtga ggacaccccg gaggaggaag aagaagagga 901 ggaggaggag gagccggcca gcccaccaga gaggaagact ctgccccaga tctgcctgct 961 cagtaacccc cactcaaggt tcaacctctg gcaggatctt cccgagatcc ggagcagcgg 1021 ggtgcttgag atcctacagc ctgaggagat taagctgcag gaggccatgt tcgagctggt 1081 cacttccgag gcgtcctact acaagagtct gaacctgctc gtgtcccact tcatggagaa 1141 cgagcggata aggaagatcc tgcacccgtc cgaggcgcac atcctcttct ccaacgtcct 1201 ggacgtgctg gctgtcagtg agcggttcct cctggagctg gagcaccgga tggaggagaa 1261 catcgtcatc tctgacgtgt gtgacatcgt gtaccgttat gcggctgacc acttctctgt 1321 ctacatcacc tacgtcagca atcagaccta ccaggagcgg acctataagc agctgctcca 1381 ggagaaggca gctttccggg agctgatcgc gcagctagag ctcgacccca agtgcagggg 1441 gctgcccttc tcctccttcc tcatcctgcc tttccagagg atcacacgcc tcaagctgtt 1501 ggtccagaac atcctgaaga gggtagaaga gaggtctgag cgggagtgca ctgctttgga 1561 tgctcacaag gagctggaaa tggtggtgaa ggcatgcaac gagggcgtca ggaaaatgag 1621 ccgcacggaa cagatgatca gcattcagaa gaagatggag ttcaagatca agtcggtgcc 1681 catcatctcc cactcccgct ggctgctgaa gcagggtgag ctgcagcaga tgtcaggccc 1741 caagacctcc cggaccctga ggaccaagaa gctcttccac gaaatttacc tcttcctgtt 1801 caacgacctg ctggtgatct gccggcagat tccaggagac aagtaccagg tatttgactc 1861 agctccgcgg ggactgctgc gtgtggagga gctggaggac cagggccaga cgctggccaa 1921 cgtgttcatc ctgcggctgc tggagaacgc agatgaccgg gaggccacct acatgctaaa 1981 ggcgtcctct cagagtgaga tgaagcgttg gatgacctca ctggccccca acaggaggac 2041 caagtttgtt tcgttcacat cccggctgct ggactgcccc caggtccagt gcgtgcaccc 2101 atacgtggct cagcagccag acgagctgac gctggagctc gccgacatcc tcaacatcct 2161 ggacaagact gacgacgggt ggatctttgg cgagcgtctg cacgaccagg agagaggctg 2221 gttccccagc tccatgactg aggagatctt gaatcccaag atccggtccc agaacctcaa 2281 ggaatgtttc cgtgtccaca agatggatga ccctcagcgc agccagaaca aggaccgcag 2341 gaagctgggc agccggaatc ggcaatgacc cccacccagg gggccagcgg gagcagggcc 2401 tgcatgagac cccgacagaa ggtggggggg gggcctctgg gaagcacagg ccagcacctc 2461 cccaggtggc aggatctggc ttggggtgcc cggccctcat ccctgcccac gcagtgagtg 2521 ctcatgtgtc ttggcccctt gcttgcaaac tggataaagg gtgcccaagc ctctcctgat 2581 gcatttgtaa acaagaaggt ttcagcagta ttacaccacc tccctcatgc ctccgagggg 2641 gtggaagggg gtgggcacac tccagggccc cccatgcccc tggcccccag ggactggaag 2701 aggctcccaa cccagagtgt ccctgtggga ggcaggcaga aggtgacaat tgacacgatt 2761 tcctgcacgc gtcctcctct accttggaag cagttagaat ctaccaggca cagatgaggc 2821 cgcccttgcc tgacggagct tgatgagcag cccttggtct ccggttccag gactgagagc 2881 ccagctgcct ctgcccaccc ttccccaggc ctctgccagc ctctggctgc acggtcaggc 2941 cctgccccat ggcaggcctg ccagagcttg gctggggacc cctcccgcct ctggctccct 3001 gatgggctgg atgtaacttg tgtcttctag ccgcttaagg agcccaggtg ttttaaggaa 3061 tgaattggtc actgcatctt gtatcgatta tggttctgag aaaagcaaat atcacttttg 3121 gctgcattaa aagaagcatc atatataaaa taaaaaaaaa aaaaaaaaaa aaaaaaa //