LOCUS BC031303 852 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens ankyrin repeat domain 39, mRNA (cDNA clone MGC:41816
IMAGE:5284947), complete cds.
ACCESSION BC031303
VERSION BC031303.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 852)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 852)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC031303.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: n Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059801.
FEATURES Location/Qualifiers
source 1..852
/db_xref="H-InvDB:HIT000041277"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41816 IMAGE:5284947"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..852
/gene="ANKRD39"
/gene_synonym="MGC41816"
/db_xref="GeneID:51239"
/db_xref="HGNC:HGNC:28640"
CDS 25..576
/gene="ANKRD39"
/gene_synonym="MGC41816"
/codon_start=1
/product="ankyrin repeat domain 39"
/protein_id="AAH31303.1"
/db_xref="GeneID:51239"
/db_xref="HGNC:HGNC:28640"
/translation="MATPRPCADGPCCSHPSAVLGVQQTLEEMDFERGIWSAALNGDL
GRVKHLIQKAEDPSQPDSAGYTALHYASRNGHYAVCQFLLESGAKCDAQTHGGATALH
RASYCGHTEITRLLLSHGSNPRVVDDDGMTSLHKAAERGHGDICSLLLQHSPALKAIR
DRKARLACDLLPCNSDLRDLLSS"
BASE COUNT 203 a 245 c 248 g 156 t
ORIGIN
1 ggatcgactg acgccggggc cgggatggcg acgcctcggc cctgcgcgga cgggccctgc
61 tgctcgcatc ccagcgcggt gctcggcgta cagcagacgc tggaggagat ggacttcgag
121 aggggaatct ggtcggcagc cctgaatgga gacctgggcc gagtgaagca tttaatccag
181 aaggccgagg acccaagtca gcccgactcg gccggctaca ctgcgctgca ctatgccagc
241 cgcaatgggc actacgctgt gtgccagttc ctgctggaaa gcggagctaa gtgtgatgcc
301 cagacccacg ggggtgccac tgctctgcac cgagccagct actgcgggca cactgaaatc
361 acgcggctcc tgctatcaca tgggtccaac cccagggtgg tggatgacga cggcatgacc
421 agtctgcata aggctgctga gaggggtcac ggggacatct gctccctcct cctgcaacac
481 agcccagccc tgaaggccat ccgggaccga aaggcacggc tagcatgtga cctgctgcct
541 tgcaacagtg acctgcggga cctgctatcc agctgagccg ccaccctatc tccagctgcc
601 tttaaagggt acacagacca gttctccaag cccctgcctt ggtcagcatc catgctgctg
661 ggcagggaac tgaggccaga ccacccagga agagccccag tctggtcact gtggaagcga
721 gggagtagat ttggtgtggc taaaagtgtt taagactgga cagatgatca tattctaaat
781 tagttcatat gagacatcta tttatttgga aaaaaataaa gttatatcct taccccaaaa
841 aaaaaaaaaa aa
//