LOCUS BC031245 1433 bp mRNA linear HUM 08-SEP-2006
DEFINITION Homo sapiens chromosome 8 open reading frame 48, mRNA (cDNA clone
MGC:39641 IMAGE:5266320), complete cds.
ACCESSION BC031245
VERSION BC031245.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1433)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1433)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: f Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55742686.
FEATURES Location/Qualifiers
source 1..1433
/db_xref="H-InvDB:HIT000041263"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39641 IMAGE:5266320"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1433
/gene="C8orf48"
/gene_synonym="FLJ25402"
/db_xref="GeneID:157773"
/db_xref="HGNC:HGNC:26345"
CDS 98..1057
/gene="C8orf48"
/gene_synonym="FLJ25402"
/codon_start=1
/product="C8orf48 protein"
/protein_id="AAH31245.1"
/db_xref="GeneID:157773"
/db_xref="HGNC:HGNC:26345"
/translation="MAICPELAQTDKSALANLSDETETLKNFTDEVQTSSSFSSSGGR
QSSPLTSGSKLEREKQTPSLEQGDTQSELLDYKNYEKKLSKKWINYLKLKDSNFERHQ
PDTKLPTEITRVSDEELNALQSYCTMKINLIHRRGDSKKKTSSRHKKLHLGLDVEASE
RDAFSCTVPDELLNRIYFKNMRTTPKQEAAAKQHISYQCPYCNRKRAELALSAFLKQK
KTLLESFLLQERIDEHLHTKDFLTRIGEAHQDFPRLSDDPRIIWKRLTEKSHIRYSGF
ERSETEQKMQRDGNSACHLPFSLPFLKRLTLIKPELVIVNDNV"
BASE COUNT 496 a 266 c 310 g 361 t
ORIGIN
1 attgagatcc attcccggag gggtcagctc ctgacgggtt cctgagccag tcttaacctg
61 ggcaaaggag atgaggagcc gagcctgatg cattgtgatg gccatctgcc cagaattggc
121 ccaaacggac aaaagtgctc ttgcaaacct ttctgatgag actgagactt tgaagaactt
181 tactgatgag gtacagactt ccagctcatt cagctcctct ggaggacggc agtcctcgcc
241 cctgacctct gggagcaaac tggagaggga aaagcagact ccaagcttgg aacaaggaga
301 cacacaatct gagcttttgg actataaaaa ttatgaaaag aagttgagta aaaaatggat
361 caactacctc aagctcaaag actctaactt tgaacggcac caaccagaca ccaaacttcc
421 aacagaaatc actcgggtat cagatgaaga attgaatgcc ctgcagtctt attgcaccat
481 gaagataaat ttgattcatc gtagagggga ttctaagaag aagacgagca gcagacataa
541 aaagctgcat cttggattgg atgtagaggc ttcagagaga gatgccttta gttgtactgt
601 acccgatgaa cttttgaaca gaatctactt taaaaacatg aggacaacgc caaaacagga
661 ggcagcagct aagcaacaca tatcttatca gtgtccctat tgtaacagga aaagagcgga
721 gctggccctg tctgcctttc tgaaacaaaa gaagacttta ctggagtcat ttctactcca
781 agagagaata gatgaacatc ttcataccaa agactttctc acccgtattg gagaagcaca
841 tcaagacttt cccaggcttt cagatgaccc cagaataatc tggaaaagac tgactgagaa
901 aagtcatatc agatactctg gttttgaaag atcagagaca gagcagaaga tgcagcgaga
961 tggaaatagt gcttgtcatt taccattttc tctgccattt ctcaagcgac ttactctaat
1021 caaaccagag ctggtgattg ttaatgataa tgtgtaatgt ggatagatgt ctttgttgtg
1081 tatttgagta attaccataa tttctacagg cacttgggaa actaacttaa gactttacta
1141 tgcttccttc acagatttga ggactaagaa ctttcacttt ttttttccta ttatagaagg
1201 cactgttgta gttggaatag ttataaaaac ttttacaaaa ttccaagaga actatgttgg
1261 tagtttgggc caggatgttg atggtacaga agcaaagtag tatggggatg taagagaaac
1321 ttaaaaagta ataactgtct ttggcgatca aatggctatg gggaattaat aaatagtaga
1381 tgtttgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//