LOCUS BC031222 2097 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens serum response factor binding protein 1, mRNA (cDNA
clone MGC:39522 IMAGE:5297296), complete cds.
ACCESSION BC031222
VERSION BC031222.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2097)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2097)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: n Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749138.
FEATURES Location/Qualifiers
source 1..2097
/db_xref="H-InvDB:HIT000041256"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39522 IMAGE:5297296"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2097
/gene="SRFBP1"
/gene_synonym="FLJ25286"
/gene_synonym="P49"
/gene_synonym="p49/STRAP"
/gene_synonym="STRAP"
/db_xref="GeneID:153443"
/db_xref="HGNC:HGNC:26333"
CDS 44..1333
/gene="SRFBP1"
/gene_synonym="FLJ25286"
/gene_synonym="P49"
/gene_synonym="p49/STRAP"
/gene_synonym="STRAP"
/codon_start=1
/product="serum response factor binding protein 1"
/protein_id="AAH31222.1"
/db_xref="GeneID:153443"
/db_xref="HGNC:HGNC:26333"
/translation="MAQPGTLNLNNEVVKMRKEVKRIRVLVIRKLVRSVGRLKSKKGT
EDALLKNQRRAQRLLEEIHAMKELKPDIVTKSALGDDINFEKIFKKPDSTATERAIAR
LAVHPLLKKKIDVLKAAVQAFKEARQNVAEVESSKNASEDNHSENTLYSNDNGSNLQR
EATVISEQKVKETKILAKKPIHNSKEKIAKMEHGPKAVTIANSPSKPSEKDSVVSLES
QKTPADPKLKTLSQTKKNKGSDSSLSGNSDGGEEFCEEEKEYFDDSTEERFYKQSSMS
EDSDSGDDFFIGKVRRTRKKESSCHSSVKEQKPLEKVFLKEDTGETHGDTRNDKIKPS
TETRKLESVFFHSLSGSKSSRRNFKEQAPKTRSLDFPQNEPQIKNQFNKKLSGRLENT
KQQLQLPLHPSWEASRRRKEQQSNIAVFQGKKITFDD"
BASE COUNT 747 a 368 c 399 g 583 t
ORIGIN
1 ggttcacgtg caggcagcgg cggatcatat tccttcatct accatggctc agccgggaac
61 tctgaacctc aataacgagg ttgtgaagat gagaaaagaa gtgaagagaa ttcgagtttt
121 agttatccga aaacttgtca ggagtgttgg ccgactgaag tcaaaaaagg gtactgaaga
181 tgcactgtta aaaaaccaaa gacgggcgca aagattgctt gaagaaatcc atgccatgaa
241 ggaattgaaa cctgacatag taactaaatc tgctcttggt gatgatatca actttgaaaa
301 aatcttcaaa aagccagatt ctactgcaac tgaaagagca attgccagac tagcagtaca
361 tcctcttctg aagaaaaaga tagatgtgct aaaagctgct gtacaagcct ttaaagaagc
421 aagacaaaat gttgctgaag ttgagtcatc aaagaatgct tcagaggaca atcattctga
481 gaatactttg tattcaaatg ataatggaag taatttacag cgtgaagcaa ctgtcatcag
541 tgagcaaaaa gtcaaagaaa ccaaaatatt ggcgaagaaa ccaatacata attcaaagga
601 aaaaatagca aagatggaac atggacctaa agcagtgact attgcaaatt ctccatcaaa
661 gccttcagaa aaggattctg tagtttccct tgagtcccag aagacacctg ctgacccaaa
721 actgaaaact ctaagtcaaa ccaaaaaaaa caaaggatct gatagctcac tctctggtaa
781 cagtgatggc ggagaagaat tttgtgaaga ggagaaggaa tattttgatg atagcacaga
841 agaaaggttt tacaagcagt cttccatgtc tgaagatagt gatagcggtg acgacttctt
901 cattgggaaa gtcagacgga cacgaaagaa ggaaagtagt tgtcattctt cagttaagga
961 acaaaaacca ctagaaaaag tgtttcttaa agaagataca ggtgaaactc atggggatac
1021 aagaaatgac aaaatcaagc caagtacaga aaccagaaag ttagaatcag tgtttttcca
1081 ctctttatct ggatctaaaa gctctagaag aaatttcaaa gaacaggctc caaaaacaag
1141 atccctagat tttccacaga atgagcctca gatcaagaat cagtttaata agaagctatc
1201 aggaagactt gaaaatacaa aacagcaatt gcagctgcct cttcatcctt catgggaagc
1261 aagcagaagg cgaaaagaac agcaatctaa tattgctgtg tttcagggga aaaaaattac
1321 gtttgatgat tgattggtgc ctctttctgc aaacttttcc atctaaaaaa aaaaatgttt
1381 tttttgggac aggatctcat tctgttgccc agactggagt gcagtattgc aatcacggct
1441 cactgcagcc tcgaactcct gggctcaagt gatcctccca cctctgcctc ccaaagggct
1501 gggactgcag gtgcatgcac taccatgccc agctttctca ccccaggctc tgcagctatt
1561 acttaaactc gtatttgaat aagtctcttg gggagaatta tagaatgttt gtttttgtat
1621 ttttttttaa agtaaattca acttacgctt atataagcct ttcacaaatc caatatgtac
1681 ttaaattgat ttttaataat atccctcaga ctgtttccct tatgaagtaa tttggggatt
1741 ttagtgatct catattttct ctttagtgct tatcatgaaa tgtgcttcac tggttcagct
1801 ctgttgtttc cttaaacata aatgtcaata tatatttaaa ataataatgg aaacatagga
1861 aatcagctat ttaaaccaga tcacccttgt taaaaatcat tcttgttagc aaactaaaat
1921 agtaactttt attatggatg tacagataaa tattaatttt attatagttt taagtacttg
1981 tgatcatgta ctttttgatt ctaaaatagt tgtctaggac aattttggga ttcttaatta
2041 tattttagtt aagaaaattg tttaaatata gcaatacaac caaaaaaaaa aaaaaaa
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