LOCUS BC031102 1450 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens phosphatidylethanolamine binding protein 1, mRNA (cDNA
clone MGC:33956 IMAGE:5300366), complete cds.
ACCESSION BC031102
VERSION BC031102.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1450)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1450)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: o Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1450
/db_xref="H-InvDB:HIT000041250"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33956 IMAGE:5300366"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1450
/gene="PEBP1"
/gene_synonym="HCNP"
/gene_synonym="PEBP"
/gene_synonym="RKIP"
/db_xref="GeneID:5037"
/db_xref="HGNC:HGNC:8630"
/db_xref="MIM:604591"
CDS 89..652
/gene="PEBP1"
/gene_synonym="HCNP"
/gene_synonym="PEBP"
/gene_synonym="RKIP"
/codon_start=1
/product="phosphatidylethanolamine binding protein 1"
/protein_id="AAH31102.1"
/db_xref="GeneID:5037"
/db_xref="HGNC:HGNC:8630"
/db_xref="MIM:604591"
/translation="MPVDLSKWSGPLSLQEVDEQPQHPLHVTYAGAAVDELGKVLTPT
QVKNRPTSISWDGLDSGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGNDISSGTV
LSDYVGSGPPKGTGLHRYVWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYEL
RAPVAGTCYQAEWDDYVPKLYEQLSGK"
BASE COUNT 370 a 340 c 396 g 344 t
ORIGIN
1 tgagtgtgct gagctctccg cgtcgcctct gtcgcccgcg cctggcctac cgcggcactc
61 ccggctgcac gctctgcttg gcctcgccat gccggtggac ctcagcaagt ggtccgggcc
121 cttgagcctg caagaagtgg acgagcagcc gcagcaccca ctgcatgtca cctacgccgg
181 ggcggcggtg gacgagctgg gcaaagtgct gacgcccacc caggttaaga atagacccac
241 cagcatttcg tgggatggtc ttgattcagg gaagctctac accttggtcc tgacagaccc
301 ggatgctccc agcaggaagg atcccaaata cagagaatgg catcatttcc tggtggtcaa
361 catgaagggc aatgacatca gcagtggcac agtcctctcc gattatgtgg gctcggggcc
421 tcccaagggc acaggcctcc accgctatgt ctggctggtt tacgagcagg acaggccgct
481 aaagtgtgac gagcccatcc tcagcaaccg atctggagac caccgtggca aattcaaggt
541 ggcgtccttc cgtaaaaagt atgagctcag ggccccggtg gctggcacgt gttaccaggc
601 cgagtgggat gactatgtgc ccaaactgta cgagcagctg tctgggaagt agggggttag
661 cttggggacc tgaactgtcc tggaggcccc aagccatgtt ccccagttca gtgttgcatg
721 tataatagat ttctcctctt cctgcccccg ttggcatggg tgagacctga ccagtcagat
781 ggtagttgag ggtgactttt cctgctgcct ggcctttata attttactca ctcactctga
841 tttatgtttt gatcaaattt gaacttcatt ttggggggta ttttggtact gtgatggggt
901 catcaaatta ttaatctgaa aatagcaacc cagaatgtaa aaaagaaaaa actgggggga
961 aaaagaccag gtctacagtg atagagcaaa gcatcaaaga atctttaagg aaggtttaaa
1021 aaaaaaaaaa aaaaaaaaga ttggttgcct ctgcctttgt gatcctgagt ccagaatggt
1081 acacaatgtg attttatggt gatgtcactc acctagacaa ccagaggctg gcattgaggc
1141 taacctccaa cacagtgcat ctcagatgcc tcagtaggca tcagtatgtc actctggtcc
1201 ctttaaagag caatcctgga agaagcagga gggagggtgg ctttgctgtt gttgggacat
1261 ggcaatctag accggcagca gcgctcgctg acagcttggg aggaaacctg agatctgtgt
1321 tttttaaatt gatcgttctt catgggggta agaaaagctg gtctggagtt gctgaatgtt
1381 gcattaattg tgctgtttgc ttgtagttga ataaaaatag aaacctgaat gaagaaaaaa
1441 aaaaaaaaaa
//