LOCUS BC031083 2273 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens plastin 1 (I isoform), mRNA (cDNA clone MGC:33811
IMAGE:5297758), complete cds.
ACCESSION BC031083
VERSION BC031083.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2273)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2273)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: m Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4505896.
FEATURES Location/Qualifiers
source 1..2273
/db_xref="H-InvDB:HIT000041239"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33811 IMAGE:5297758"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2273
/gene="PLS1"
/gene_synonym="I-PLASTIN"
/db_xref="GeneID:5357"
/db_xref="MIM:602734"
CDS 321..2210
/gene="PLS1"
/gene_synonym="I-PLASTIN"
/codon_start=1
/product="PLS1 protein"
/protein_id="AAH31083.1"
/db_xref="GeneID:5357"
/db_xref="MIM:602734"
/translation="MENSTTTISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEAS
LPLPGYKVREIVEKILSVADSNKDGKISFEEFVSLMQELKSKDISKTFRKIINKREGI
TAIGGTSTISSEGTQHSYSEEEKVAFVNWINKALENDPDCKHLIPMNPNDDSLFKSLA
DGILLCKMINLSEPDTIDERAINKKKLTPFTISENLNLALNSASAIGCTVVNIGASDL
KEGKPHLVLGLLWQIIKVGLFADIEISRNEALIALLNEGEELEELMKLSPEELLLRWV
NYHLTNAGWHTISNFSQDIKDSRAYFHLLNQIAPKGGEDGPAIAIDLSGINETNDLKR
AGLMLQEADKLGCKQFVTPADVVSGNPKLNLAFVANLFNTYPCLHKPNNNDIDMNLLE
GESKEERTFRNWMNSLGVNPYINHLYSDLADALVIFQLYEMIRVPVNWRHVNKPPYPA
LGGNMKKIENCNYAVELGKNKAKFSLVGIAGQDLNEGNSTLTLALVWQLMRRYTLNVL
SDLGEGEKVNDEIIIKWVNQTLKSANKKTSISSFKDKSISTSLPVLDLIDAIAPNAVR
QEMIRRENLSDEDKLNNAKYAISVARKIGARIYALPDDLVEVKPKMVMTVFACLMGKG
LNRIK"
BASE COUNT 737 a 443 c 479 g 614 t
ORIGIN
1 aattctccat aggaacacta tcaagtcttt ttccataaaa gtcagataaa agaaagatca
61 catttcttga tattctttaa agcaacttta tttttattgt catgcttcat cctgcccgaa
121 tactgccaag tctttctcag gcacctggaa tctgctcctc agcctctgtt gtcctgggtc
181 taatgtagag caaaaggctg agaggaagct cttctattct ccatcatcgg tcttcagtgg
241 ctacctggga aacacccctt ggcttagtcg gcagattctc tccgatataa agacctgaag
301 atagtctttt ctgtccaaag atggaaaaca gtactactac catttctcgg gaggagcttg
361 aagaactaca agaggcattt aataaaatag atattgacaa tagtgggtat gtcagtgact
421 atgaacttca agacctgttt aaggaagcaa gccttcctct gcctggctac aaggtgcgcg
481 agattgtgga gaaaattcta tcagttgctg acagcaacaa agatggcaaa atcagttttg
541 aagagtttgt gtcactaatg caagaattaa aaagcaaaga tatcagcaaa acattccgaa
601 aaataattaa caagagggaa gggattactg ctattggagg aacttcaact atttccagtg
661 agggcacaca gcattcttac tcagaggaag aaaaagtggc ttttgttaac tggataaaca
721 aagccctgga gaatgaccct gactgtaagc atcttatacc catgaatccc aatgatgata
781 gtcttttcaa gtcacttgca gatggcatcc ttctttgcaa aatgatcaac ttatctgaac
841 cagatacaat tgatgaaaga gccatcaata agaaaaagct cacgccattc actatttctg
901 aaaatttaaa cctagctctg aattctgcct cagccattgg ttgtacagtg gtcaacattg
961 gtgcatcaga tctcaaagaa ggaaaacctc acttggtctt gggacttctc tggcagatca
1021 tcaaagttgg cctttttgct gatattgaga tttccaggaa tgaagctctg attgcattgt
1081 taaatgaagg tgaggaacta gaggagctga tgaagctttc tcccgaggaa ttactgctgc
1141 gatgggtgaa ctaccatctg accaatgcag gatggcatac catcagcaac ttcagccaag
1201 acattaagga ctcgagagcc tattttcatc tgcttaatca gattgcccct aaaggtgggg
1261 aagatggacc tgccattgcc attgaccttt caggaattaa tgagacaaat gacctgaagc
1321 gtgctggact catgcttcaa gaagcagata aactgggctg caaacagttt gttactcctg
1381 cagatgtggt ttcaggcaat cctaaactta atttagcttt tgtagctaat ttgtttaaca
1441 catacccatg cctgcacaag ccgaataata atgacatcga tatgaattta ctggaaggag
1501 agagcaagga agagagaaca tttcggaact ggatgaattc cttgggagtc aacccataca
1561 ttaatcattt gtacagtgac cttgcagatg ctttagtgat ctttcagctc tatgagatga
1621 tccgagtgcc agtcaactgg agacatgtca acaaacctcc ttatcctgcc cttggaggga
1681 acatgaagaa gattgaaaac tgtaactatg cagtggaact tgggaagaac aaggccaaat
1741 tctccttggt tggcattgct gggcaggacc taaatgaagg gaattcaaca cttaccctgg
1801 cattggtatg gcagctgatg agaaggtaca cattgaatgt gttatcggat cttggagagg
1861 gtgaaaaagt aaatgatgaa attataatta aatgggtcaa tcagactctt aaaagtgcaa
1921 acaaaaagac ttctatttcc agcttcaagg ataaatctat aagcacaagt ttacctgtcc
1981 tagatttaat agatgccatt gcaccaaatg cagttcgtca agaaatgatc aggagagaaa
2041 acttatctga tgaggacaag ctgaacaatg ctaaatacgc catttcagtt gctcgaaaga
2101 tcggtgcccg gatatatgca ttacctgatg acctcgtaga agtgaaacca aagatggtta
2161 tgacggtgtt tgcatgctta atgggaaaag gactgaacag aataaaataa tcatttcata
2221 tgattttctg ccacattaaa catattgtat gcctcacaaa aaaaaaaaaa aaa
//