LOCUS BC031079 2205 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens CUG triplet repeat, RNA binding protein 1, mRNA (cDNA clone MGC:33773 IMAGE:5297141), complete cds. ACCESSION BC031079 VERSION BC031079.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2205) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2205) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 48 Row: l Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38570080. FEATURES Location/Qualifiers source 1..2205 /db_xref="H-InvDB:HIT000041237" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33773 IMAGE:5297141" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2205 /gene="CUGBP1" /gene_synonym="BRUNOL2" /gene_synonym="CUG-BP" /gene_synonym="CUGBP" /gene_synonym="hNab50" /gene_synonym="NAB50" /db_xref="GeneID:10658" /db_xref="HGNC:HGNC:2549" /db_xref="MIM:601074" CDS 202..1653 /gene="CUGBP1" /gene_synonym="BRUNOL2" /gene_synonym="CUG-BP" /gene_synonym="CUGBP" /gene_synonym="hNab50" /gene_synonym="NAB50" /codon_start=1 /product="CUG triplet repeat, RNA binding protein 1" /protein_id="AAH31079.1" /db_xref="GeneID:10658" /db_xref="HGNC:HGNC:2549" /db_xref="MIM:601074" /translation="MNGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYE INVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKN NAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAM AQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRMAQQLQQQMQQISAASVWGNLA GLNTLGPQYLALLQQTASSGNLNTLSSLHPMGGLNAMQLQNLAALAAAASAAQNTPSG TNALTTSSSPLSVLTSSAGSSPSSSSSNSVNPIASLGALQTLAGATAGLNVGSLAGMA ALNGGLGSSGLSNGTGSTMEALTQAYSGIQQYAAAALPTLYNQNLLTQQSIGAAGSQK EGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPV SAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY" BASE COUNT 579 a 524 c 495 g 607 t ORIGIN 1 atactttgaa aataacagct cttttttgtt ccctcgtgtg tctcttccca attgtatccc 61 tattgtattt tctcatagta tgtttcagca gaaatcaagg tagacgaagt aacctcttgt 121 cctgaatttt catagttgct cattcttaat aatggcagca gaagcaacaa tgagagcaac 181 tacctcctca gctcaaagaa aatgaacggc accctggacc acccagacca accagatctt 241 gatgctatca agatgtttgt gggccaggtt ccaaggacct ggtctgaaaa ggacttgcgg 301 gaactcttcg aacagtatgg tgctgtgtat gaaatcaacg tcctaaggga taggagccaa 361 aacccgcctc agagcaaagg gtgctgtttt gttacatttt acacccgtaa agctgcatta 421 gaagctcaga atgctcttca caacatgaaa gtcctcccag ggatgcatca ccctatacag 481 atgaaacctg ctgacagtga gaagaacaat gcagtggaag acaggaagct gtttattggt 541 atgatttcca agaagtgcac tgaaaatgac atccgagtca tgttctcttc gtttggacag 601 attgaagaat gccggatatt gcggggacct gatggcctga gccgaggttg tgcatttgtg 661 acttttacaa caagagccat ggcacagacg gctatcaagg caatgcacca agcacagacc 721 atggagggtt gctcatcacc catggtggta aaatttgctg atacacagaa ggacaaagaa 781 cagaagagaa tggcccagca gctccagcag cagatgcagc aaatcagcgc agcatctgtg 841 tggggaaacc ttgctggtct aaatactctt ggaccccagt atttagcact ccttcagcag 901 actgcctcct ctgggaacct caacaccctg agcagcctcc acccaatggg agggttgaat 961 gcaatgcagt tacagaattt ggctgcacta gctgctgcag ctagtgcagc tcagaacaca 1021 ccaagtggta ccaatgctct cactacatcc agcagtcccc tcagcgtgct cactagttca 1081 gcagggtcct cacctagctc tagcagcagt aattctgtca accccatagc ctcacttgga 1141 gccctgcaga cattagctgg agcaacggct ggcctcaatg ttggctcttt ggcaggaatg 1201 gctgctttaa atggtggcct gggcagcagt ggcctttcca atggcaccgg gagcaccatg 1261 gaggccctca ctcaggccta ctcgggtatc cagcaatatg ctgctgctgc gctccccact 1321 ctgtacaacc agaatcttct gacacagcag agtattggtg ctgctggaag ccagaaggaa 1381 ggtccagagg gagccaacct gttcatctac cacctgcccc aggagtttgg tgatcaggac 1441 ctgctgcaga tgtttatgcc ctttgggaat gtcgtgtctg ccaaggtttt catagacaag 1501 cagacaaacc tgagcaagtg ttttggtttt gtaagttacg acaatcctgt ttcggcccaa 1561 gctgccatcc agtccatgaa cggctttcag attggcatga agcggcttaa agtgcagctc 1621 aaacgttcga agaatgacag caagccctac tgagcgtgct cccctctgag actggagtga 1681 gagggtcttc tgattcctgc cgtttgttca tcgttgtgcc taaagcatgt cgatgtggcg 1741 tcaagtacat cgtccaaatc cctgtctctt cagcttctct gatgcttgaa ctctcacctt 1801 tgaccttgtg ttgacctttg atgctgatgt gtatttttat tatgtttgtt tctttcttcg 1861 tttttttttc tttttttctt tccttttttt tccttttgtg ctgccaaatt ggttttgcta 1921 gaacgactgc tgaaggggaa atatttaaac ttgcatttga atataaaaaa aatctatttt 1981 tctagaactt cataagataa ccacttgatt ttgtgattcc aattctttgt aattgtcttc 2041 agagcagccc tactagcaca taccgcgtgg tgtttgtatt tctgtgaaca cacagccagt 2101 ccgtttctag gctttgtttc tctgtgtgct tagttttaaa gacaactttg aagtaaacaa 2161 tgaaataaaa gatgtcacta aaacctctga aaaaaaaaaa aaaaa //