LOCUS BC031074 2380 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens poly (ADP-ribose) polymerase family, member 16, mRNA
(cDNA clone MGC:33721 IMAGE:5274010), complete cds.
ACCESSION BC031074
VERSION BC031074.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2380)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2380)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: f Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52851456.
FEATURES Location/Qualifiers
source 1..2380
/db_xref="H-InvDB:HIT000041236"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33721 IMAGE:5274010"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2380
/gene="PARP16"
/gene_synonym="FLJ20509"
/gene_synonym="FLJ25281"
/db_xref="GeneID:54956"
/db_xref="HGNC:HGNC:26040"
CDS 67..1035
/gene="PARP16"
/gene_synonym="FLJ20509"
/gene_synonym="FLJ25281"
/codon_start=1
/product="poly (ADP-ribose) polymerase family, member 16"
/protein_id="AAH31074.1"
/db_xref="GeneID:54956"
/db_xref="HGNC:HGNC:26040"
/translation="MQPSGWAAAREAAGRDMLAADLRCSLFASALQSYKRDSVLRPFP
ASYARGDCKDFEALLADASKLPNLKELLQSSGDNHKRAWDLVSWILSSKVLTIHSAGK
AEFEKIQKLTGAPHTPVPAPDFLFEIEYFDPANAKFYETKGERDLIYAFHGSRLENFH
SIIHNGLHCHLNKTSLFGEGTYLTSDLSLALIYSPHGHGWQHSLLGPILSCVAVCEVI
DHPDVKCQTKKKDSKEIDRRRARIKHSEGGDIPPKYFVVTNNQLLRVKYLLVYSQKPP
KRAPSQLSWFSSHWFTVMISLYLLLLLIVSVINSSAFQHFWNRAKR"
BASE COUNT 614 a 610 c 551 g 605 t
ORIGIN
1 gttgaacgca cgctcgccct tgcccctaac cagcgcgtct accccggcaa cgcgcagtga
61 cctgggatgc agccctcagg ctgggcggcc gccagggagg cggcgggccg cgacatgctg
121 gccgccgacc tccggtgcag cctcttcgcc tcggccctgc agagctacaa gcgcgactcg
181 gtgctgcggc ccttccccgc gtcctacgcc cgcggcgact gtaaggactt tgaagccctg
241 cttgcagatg ccagcaagtt acctaacctg aaagaacttc tccagtcctc cggagacaac
301 cacaaacggg cctgggacct ggtgagctgg attttatcct caaaggtcct gacaatccac
361 agtgcaggga aggcagagtt tgaaaagatc caaaagctga ctggggctcc tcacacgcct
421 gttcctgcac cggacttcct gtttgaaatt gagtactttg acccagccaa cgccaaattt
481 tatgagacca aaggagaacg agacctaatc tatgcatttc atggtagccg cctagaaaac
541 ttccattcca ttatccacaa tggcctgcac tgccatctga acaagacatc cttgttcgga
601 gaggggacct acctcaccag tgacttaagc ctggccctca tatacagccc ccatggccat
661 gggtggcagc acagcctcct cggccccatc cttagctgtg tggccgtgtg tgaggtcatt
721 gaccatccgg acgtcaagtg ccaaaccaag aagaaggatt ccaaggagat agatcgcaga
781 cgagcgagaa tcaaacatag tgaaggggga gacatccctc ccaagtactt cgtggtcacc
841 aataaccagc tgctgcgagt gaagtacctc ctggtgtatt cacagaagcc acccaagagg
901 gctccgagcc agctctcctg gttttccagc cattggttta ccgtcatgat atccctgtat
961 ctgctgctgc tgctcatagt gagtgtcatc aactcctctg ctttccaaca cttttggaat
1021 cgtgcgaaaa gataatcttt ctgggcctgg tgtgggggct acctcaacta tgtgccttat
1081 ggtaacttgt tctgtacctc ctatgcctca tgtccagcca ggttgagcct aggggccagt
1141 tgggggacca caggacaatt ttcatatggc ctaaatgtat ccattgcctt tgatgatgtt
1201 cccagccata ctccagtcaa cggggactac tagtccctca ctcttaggtt ttaggggagt
1261 ccttccatct gctccttctt aaactgtcct agggagttgg cttttcagcc agggccaaag
1321 gaaaaagccc tgctgcattt aaaaacaaag tgtccaagct gtcagtggtg tgtttacaat
1381 ctctcctggc agaggttggc cctttctcta atgccttctg gaaggcggaa aatgtgggaa
1441 ctataaatca ctaggcggtt gccttgtttt gacttgagac acccaagagg aacagtcatg
1501 tttctcataa aaatcagtgg gatcattttt gaattccatc agcctttgta tgtgagtgca
1561 aaacatttta acagttttct caaatcaaca aacagccttc tcctatagct gtacttgccc
1621 ccctccccaa aaaaccatgg atgagaaaga aaggagtcag gggcctgata aaaaatacag
1681 acttaatgag caactcaaga tgagaaaact gctctttttc caaaaattac caactgctga
1741 ttacagctga aatggaacca aatgtttgtt ttctgatttt tttttaatag ctgtttaaca
1801 aattagtctt tgctgagtaa aaggggaaat ttctaaacct agtgcactgt ttggccagtg
1861 tccacagcct cttttctggc tgtgttttag agaaagggat ttgagctata ggctcgcctc
1921 ctgttctcat tctcacaaag ctgccttgac tgtggcctgc aaccacgagt gccatgcttt
1981 caggtcttct gtggcctact ggccttcaag acagaggcat gccccagtgt gccacagatc
2041 catgtggatg gagcctcctt cagaggggtc acaggtcttt gagactcagc ctgggcttta
2101 atgtgtagga aaagccttct ggccacccag agagccggag ccctgcttgc tgtattctct
2161 gctcccttct tcctgctggg ttttagccat aatagggccc ggtacgattt gggagtgaca
2221 tttctgtaaa gaagaggaaa aatcattttt ctataatttg taaagttgtg aaagagccac
2281 tacaacagtt tttacattga ttattggaac atttcagaat aaataaagat attttcttaa
2341 tgaaaaaaaa aaaaaaaaaa aaacaaaaaa aaaaaaaaaa
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