LOCUS BC031073 2445 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens poly (ADP-ribose) polymerase family, member 11, mRNA
(cDNA clone MGC:33714 IMAGE:5284275), complete cds.
ACCESSION BC031073
VERSION BC031073.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2445)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2445)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: h Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66348099
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..2445
/db_xref="H-InvDB:HIT000041235"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33714 IMAGE:5284275"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2445
/gene="PARP11"
/db_xref="GeneID:57097"
/db_xref="HGNC:HGNC:1186"
CDS 229..927
/gene="PARP11"
/codon_start=1
/product="PARP11 protein"
/protein_id="AAH31073.1"
/db_xref="GeneID:57097"
/db_xref="HGNC:HGNC:1186"
/translation="MFHKAEELFSKTTNNEVDDMDTSDTQWGWFYLAECGKWHMFQPD
TNSQCSVSSEDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLIKRAPF
SISAFSYICENEAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMDRNRIK
RIQRIQNLDLWEFFCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDWRING
IHGAVFGKDNMWKL"
BASE COUNT 812 a 492 c 565 g 576 t
ORIGIN
1 gactggccaa cgtcgggcgg aagtcgggag gttgggtggt ctgtaaacgc tggcttgtga
61 cagggagggg gaggaggaag gccttcgtaa aggttgcatc tccgtccctt cgctcccggg
121 gacccgcggg aaaaaaaaaa atccaacacc caggccccgc ggctagcccc ttcccacagg
181 ctctctccgc tcgattttgt caccgttatg tgggaagcga atccagagat gtttcacaaa
241 gcagaagaat tattttctaa aacaacaaac aatgaagtgg atgacatgga cacgtcagat
301 acccagtggg gctggtttta cttggcagaa tgtgggaagt ggcacatgtt tcagccggat
361 accaacagtc agtgttcagt tagcagtgaa gatatcgaaa aaagcttcaa aacaaaccct
421 tgtggctcca tttcttttac tacttccaaa ttcagctaca agatagactt tgcagaaatg
481 aagcaaatga atctcaccac tggaaagcag cgcttaataa aaagagcccc cttttctatc
541 agtgctttca gttacatctg tgaaaacgag gccatcccta tgccaccaca ctgggagaat
601 gtgaatactc aagtaccata tcagcttatt cctctgcaca atcaaacaca tgaatataat
661 gaagttgcta atctctttgg gaagacgatg gatcgcaacc gaattaaaag aattcagaga
721 attcaaaacc tagatttgtg ggagttcttt tgcaggaaaa aggctcagct caagaaaaaa
781 agaggtgtgc ctcagattaa tgaacaaatg ctgtttcatg gtaccagcag tgaatttgtg
841 gaagcaatct gcattcataa ctttgattgg agaataaatg gtatacatgg tgctgtcttt
901 ggaaaagata acatgtggaa gctgtaggca ttataagccc acgtttgatg aacagtctca
961 gagaatcagc gtgcaagctc atttcctcca ctttattcct ataagaagaa gatcaagcct
1021 caacttggga gccagctgat ctgaatttta ttcctggctt tgctgtctga ttcagtgtga
1081 ccttggataa ctcaccagag agggaaggtt cacttttcag aaggttaagt gcatggaaag
1141 aacctctgat ggaaatcaag gagtactgac agcacgatgg ggaaaataag agagaaaaga
1201 aaaaaaggaa gatggaaatt ctgacaagga aattaagatg catgtccatg gatgtttttt
1261 gttttgatga tagcaaaaga gtgatatatt tgcataacaa tatgaggaca ctgaggcaac
1321 tcccctcacc ccagggcaca tagctaggaa gtggcaaagc caatctggct ggagtaccct
1381 gtactagcca ctctgctact ctgctgcttt taagtctgta ttaatggcaa gcacgcgcgc
1441 acgcgcacac acacaactcc tttatccttg ccatcgtctt tcaaagataa gaatcaaaga
1501 ccaaagcgtc cttagatgtt gtatcagagt tcaagcaagg gacagaaatc accgcagaaa
1561 tttggacagg gaaaatttaa tataaagaat tgttgactat gtaaagttct gttaactact
1621 gaaaggggaa aaagaactct aagaagcagc aaggcagtta actgcagaaa gtggcttcta
1681 cacctaagac taagggaaaa atgaacaagg aaggaactta caaactattg gaaaaggtcc
1741 ctgcaaggct ggattcagac ctctgaggag agttcctggt tgttacagga acatgctgcc
1801 tgtagtcctg gtgccaagga aacttgctga agggtacccg ctgttaaact gcatagggca
1861 gcctgccact gctgtaaacc ctgaccggga taaccgcgtg ccgatctgcc tgccactata
1921 tgggaaaaca gaaaactaga tgaagaagaa aaaggcctct gtcttccagc catgcattgt
1981 tccttccaca ctccttattg tcaaagccta acatggagcc agctggcaaa ggaaaagtgt
2041 ggcctgtaga gttcagcccc agtattacaa agcaggatga agaaactggg attggagctg
2101 aaagacaata aattaataac tgatacagat ggaaagtaca tttttcaacc caaggataga
2161 aagaagcccc aaacatcatc acacaaaagg aagacagatt ggctgagaga ggcatttaca
2221 ttaaaaaaat aaaatactga aggtttacag ggacacatct cttggagtag agcagcctac
2281 ctccaaggta ttggataagc aagacaaggt gttataaagc ctattgtgta aatatataca
2341 gaagactgag aggttttcaa ccgaataaat gaatgcctgg tacagcgtta atatagctga
2401 gaaattcatc ctgtaacaag ttgagtcata aaaaaaaaaa aaaaa
//