LOCUS BC031064 2439 bp mRNA linear HUM 18-JAN-2007
DEFINITION Homo sapiens FRAS1 related extracellular matrix 1, mRNA (cDNA clone
IMAGE:5272747), complete cds.
ACCESSION BC031064
VERSION BC031064.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2439)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2439)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: d Column: 1
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2439
/db_xref="H-InvDB:HIT000041230"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5272747"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2439
/gene="FREM1"
/gene_synonym="QBRICK"
/gene_synonym="RP11-439N12.3"
/db_xref="GeneID:158326"
/db_xref="HGNC:HGNC:23399"
/db_xref="MIM:608944"
CDS 108..2237
/gene="FREM1"
/gene_synonym="QBRICK"
/gene_synonym="RP11-439N12.3"
/codon_start=1
/product="FREM1 protein"
/protein_id="AAH31064.2"
/db_xref="GeneID:158326"
/db_xref="HGNC:HGNC:23399"
/db_xref="MIM:608944"
/translation="MLKAALPLFTRFIISNGLRTEHGVFEITLETVDRALPVVTRNKG
LRLAQGAVGLLSPDLLQLTDPDTPAENLTFLLVQLPQHGQLYLWGTGLLQHNFTQQDV
DSKNVAYRHSGGDSQTDCFTFMATDGTNQGFIVNGRVWEEPVLFTIQVDQLDKTAPRI
TLLHSPSQVGLLKNGCYGIYITSRVLKASDPDTEDDQIIFKILQGPKHGHLENTTTGE
FIHEKFSQKDLNSKTILYIINPSLEVNSDTVEFQIMDPTGNSATPQNLELKWSHIEWS
QTEYEVCENVGLLPLEIIRRGYSMDSAFVGIKVNQVSAAVGKDFTVIPSKLIQFDPGM
STKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKAAVKILDSKGGQCHPSYSSN
QSKHSTWEKGIWHLLPPGSSSSTTSGSFHLERRPLPSSMQLAVIRGDTLRGFDSTDLS
QRKLRTRGNGKTVRPSSVYRNGTDIIYNYHGIVSLKLEDDSFPTHKRKAKVSIISQPQ
KTIKVAELPQADKVESTTDSHFPRQDQLPSFPKNCTLELKGLFHFEEGIQKLYQCNGI
AWKAWSPQTKDVEDKSCPAGWHQHSGYCHILITEQKGTWNAAAQACREQYLGNLVTVF
SRQHMRWLWDIGGRKSFWIGLNDQVHAGHWEWIGGEPVAFTNGRRGPSPRSKLGKSCV
LVQRQGKWQTKDCRRAKPHNYGCSRKL"
BASE COUNT 713 a 566 c 578 g 582 t
ORIGIN
1 agtctgcagg gaggaaagtc agaattagat attcaagatg gccgcctctg atggagtccc
61 tggcactcac tcaagcttgc atttggtaga tggtgacaca agaatccatg ctgaaggctg
121 ccttgcctct ctttaccaga ttcatcatca gcaatggact gcggaccgag cacggggtgt
181 ttgagatcac actggagact gtggacagag ccctgcctgt ggtaaccagg aacaaggggt
241 tgagactggc ccaaggggcc gtgggcctgc tttcccctga cctccttcag ctgaccgacc
301 ctgatacacc tgcggagaac ctcaccttcc tcttggttca gctcccccag catggccagc
361 tctacctgtg ggggacaggg ctacttcaac acaatttcac ccagcaggat gtggacagca
421 agaatgtggc ctatcggcac tcaggagggg actcccagac tgactgcttt actttcatgg
481 ccacagacgg gacaaaccaa ggctttattg tgaatgggag agtgtgggaa gaacctgttt
541 tattcaccat tcaggtagac caattggaca aaacagctcc tcgtatcaca ctcttgcatt
601 ccccttctca agtggggctc ctgaaaaatg gctgctacgg gatttacatc acttcccgcg
661 tgttgaaggc atcagaccct gacactgagg acgatcagat catctttaaa attctacaag
721 gcccaaaaca tggacatctg gagaacacaa caacaggtga atttatccat gagaaattta
781 gccaaaagga cttaaacagt aagactattc tttacatcat aaacccatct ttggaagtaa
841 attcagatac cgtggaattt caaatcatgg accccacagg gaactcggcc actcctcaaa
901 atttggaact gaagtggtct catattgaat ggtcacagac cgaatatgaa gtctgtgaga
961 atgtgggttt gttgcccttg gaaattatca gaaggggata ttccatggac tcggcctttg
1021 tgggtataaa ggtcaaccaa gtgtcagctg cagttggaaa agatttcacc gtgattccat
1081 ctaaactgat tcagtttgac ccaggaatgt caactaagat gtggaatata gcaattacct
1141 atgacggatt agaggaagat gatgaggtct ttgaagtaat tctgaactcc cctgtgaatg
1201 cagttcttgg cacaaagaca aaagctgcag tgaaaatttt ggactcaaaa ggaggacaat
1261 gccatccttc atattcctcc aaccaaagca agcacagcac atgggagaag ggcatttggc
1321 atctgctgcc cccagggtct tcctcatcca ccacttctgg ttcctttcat ctggaaagaa
1381 gacctcttcc atcctccatg cagctagcag tcatcagggg agacaccctg cggggctttg
1441 attctacaga tctttctcaa aggaagctta ggacccgtgg gaatggcaaa acagttcgtc
1501 catcctctgt ttatagaaat ggaacagaca tcatctataa ttatcatggg atagtttcct
1561 tgaaactgga ggatgacagt ttcccaactc acaaaaggaa ggccaaagta tccatcatta
1621 gtcagccaca aaagacaatc aaagtggcag aactgcctca agcagataag gtggaatcca
1681 caactgactc acacttcccc agacaggacc agttgccctc atttccaaag aactgcactc
1741 tggaattaaa gggactcttc cattttgaag aaggcatcca gaagctgtat cagtgcaatg
1801 ggatcgcctg gaaagcctgg agtccccaaa ccaaggatgt ggaagacaaa tcctgtccag
1861 ccgggtggca ccagcactca ggctactgtc acatcttgat cacagagcag aaaggcacct
1921 ggaatgcggc tgcccaagct tgcagggaac aatacctggg caaccttgta actgtattct
1981 ccaggcagca catgcggtgg ctctgggaca ttggtgggag aaagtccttt tggataggtt
2041 tgaacgacca agtgcatgct ggccactggg agtggatcgg tggtgaacct gttgccttca
2101 ccaatgggag aagagggccc tctccacgct ccaagcttgg aaagagctgt gttttggttc
2161 aaagacaagg gaaatggcaa acaaaagact gtaggagagc caaacctcat aattatgggt
2221 gttccagaaa actctaaata taacagaccc tacagggggc cacctggagt ttgtcaccta
2281 tttattcaca ggatctgtga atattgctcc atagaaaaca aattgttatg attgagtggg
2341 tatacctttg tgattctgtc tagtgaaaat gggacatttt taatagtgcc agaaagattg
2401 ataaataaat atttttttac aagaaaaaaa aaaaaaaaa
//