LOCUS BC031049 2227 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens programmed cell death 4 (neoplastic transformation
inhibitor), mRNA (cDNA clone MGC:33047 IMAGE:5277621), complete
cds.
ACCESSION BC031049
VERSION BC031049.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2227)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2227)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: g Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34304340.
FEATURES Location/Qualifiers
source 1..2227
/db_xref="H-InvDB:HIT000041218"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33047 IMAGE:5277621"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2227
/gene="PDCD4"
/gene_synonym="H731"
/gene_synonym="MGC33046"
/gene_synonym="MGC33047"
/db_xref="GeneID:27250"
/db_xref="HGNC:HGNC:8763"
/db_xref="MIM:608610"
CDS 154..1563
/gene="PDCD4"
/gene_synonym="H731"
/gene_synonym="MGC33046"
/gene_synonym="MGC33047"
/codon_start=1
/product="programmed cell death 4 (neoplastic
transformation inhibitor)"
/protein_id="AAH31049.1"
/db_xref="GeneID:27250"
/db_xref="HGNC:HGNC:8763"
/db_xref="MIM:608610"
/translation="MDVENEQILNVNPADPDNLSDSLFSGDEENAGTEEVKNEINGNW
ISAYSINEARINAKAKRRLRKNSSRDSGRGDSVSDSGSDALRSGLTVPTSPKGRLLDR
RSRSGKGRGLPKKGGAGGKGVWGTPGQVYDVEEVDVKDPNYDDDQENCVYETVVLPLD
ERAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREM
TSKLLSDLCGTVMSTTDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCN
TYIDSYKGTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGGQQSVNHLVKEIDML
LKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIIMVLESTGESTFKMILDLLKSLWK
SSTITVDQMKRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAGIISKQLRDLCPSR
GRKRFVSEGDGGRLKPESY"
BASE COUNT 701 a 332 c 552 g 642 t
ORIGIN
1 agtgactctc cgaggcggcg gcagagacag aagagcgggg tcggggccgg ctgaccagga
61 acctgggcga gcagcggcgg gggccagagg gattctgaag gaagatttcc attaggtaat
121 ttgtttaatc agtgcaagcg aaattaaggg aaaatggatg tagaaaatga gcagatactg
181 aatgtaaacc ctgcagatcc tgataactta agtgactctc tcttttccgg tgatgaagaa
241 aatgctggga ctgaggaagt aaagaatgaa ataaatggaa attggatttc agcatactcc
301 attaacgaag ctagaattaa tgccaaggca aaaaggcgac taaggaaaaa ctcatcccgg
361 gactctggca gaggcgattc ggtcagcgac agtgggagtg acgcccttag aagtggatta
421 actgtgccaa ccagtccaaa gggaaggttg ctggataggc gatccagatc tgggaaagga
481 aggggactac caaagaaagg tggtgcagga ggcaaaggtg tctggggtac acctggacag
541 gtgtatgatg tggaggaggt ggatgtgaaa gatcctaact atgatgatga ccaggagaac
601 tgtgtttatg aaactgtagt tttgcctttg gatgaaaggg catttgagaa gactttaaca
661 ccaatcatac aggaatattt tgagcatgga gatactaatg aagttgcgga aatgttaaga
721 gatttaaatc ttggtgaaat gaaaagtgga gtaccagtgt tggcagtatc cttagcattg
781 gaggggaagg ctagtcatag agagatgaca tctaagcttc tttctgacct ttgtgggaca
841 gtaatgagca caactgatgt ggaaaaatca tttgataaat tgttgaaaga tctacctgaa
901 ttagcactgg atactcctag agcaccacag ttggtgggcc agtttattgc tagagctgtt
961 ggagatggaa ttttatgtaa tacctatatt gatagttaca aaggaactgt agattgtgtg
1021 caggctagag ctgctctgga taaggctacc gtgcttctga gtatgtctaa aggtggaaag
1081 cgtaaagata gtgtgtgggg ctctggaggt gggcagcaat ctgtcaatca ccttgttaaa
1141 gagattgata tgctgctgaa agaatattta ctctctggag acatatctga agctgaacat
1201 tgccttaagg aactggaagt acctcatttt caccatgagc ttgtatatga agctattata
1261 atggttttag agtcaactgg agaaagtaca tttaagatga ttttggattt attaaagtcc
1321 ctttggaagt cttctaccat tactgtagac caaatgaaaa gaggttatga gagaatttac
1381 aatgaaattc cggacattaa tctggatgtc ccacattcat actctgtgct ggagcggttt
1441 gtagaagaat gttttcaggc tggaataatt tccaaacaac tcagagatct ttgtccttca
1501 aggggcagaa agcgttttgt aagcgaagga gatggaggtc gtcttaaacc agagagctac
1561 tgaatataag aactcttgca gtcttagatg ttataaaaat atatatctga attgtaagag
1621 ttgttagcac aagttttttt tttttttttt taagcacttg ttttgggtac aaggcatttc
1681 tgacatttta taaacctaca tttaagggga atttttaaag gaaatgtttt ttcttttttt
1741 tttgtttttc gagggggcaa ggagggacag aaaagtaacc tcttcttaag tggaatattc
1801 taataagcta ccttttgtaa gtgccatgtt tattatctaa tcattccaag ttttgcattg
1861 atgtctgact gccactcctt tctttcaagg acagtgtttt ttgtagtaaa atcactggtt
1921 tatacaaagc tttatttagg gggtaaagtt aagctgctaa aaccccatgt tggctgctgc
1981 tgttgagata ctgtgctttg ggagtaaaaa aagaaagtta tttctttgtc ttaaagaatt
2041 tttaaaaaat tagtcatgag acttattcat ctttccaggg aacatactga ttggtcttaa
2101 aagactagac agttaagtaa aaggtggctg gaacatctat ttttctacaa aactggaaaa
2161 atgaacctgg ttctagaaga atgtacacca aaataaaaca tgtgaagcag taaaaaaaaa
2221 aaaaaaa
//