LOCUS BC030825 3378 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens family with sequence similarity 160, member A2, mRNA
(cDNA clone MGC:26003 IMAGE:4811942), complete cds.
ACCESSION BC030825
VERSION BC030825.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3378)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3378)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: j Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14149782.
FEATURES Location/Qualifiers
source 1..3378
/db_xref="H-InvDB:HIT000041158"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26003 IMAGE:4811942"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3378
/gene="FAM160A2"
/gene_synonym="DKFZP566M1046"
/db_xref="GeneID:84067"
/db_xref="HGNC:HGNC:25378"
CDS 273..3191
/gene="FAM160A2"
/gene_synonym="DKFZP566M1046"
/codon_start=1
/product="FAM160A2 protein"
/protein_id="AAH30825.1"
/db_xref="GeneID:84067"
/db_xref="HGNC:HGNC:25378"
/translation="MERMNWLSRLASRGPGHRIPQGANLQTPVMADPETCLMVFKNHW
SQVVRILERQGPRAAPGGADDLSAVRNHTYQMLTLLAEDRAVPSAPTGPGPLLEFALH
EDLLTRVLTWQLQWDELGDGVEERRAEQLKLFEMLVSEARQPLLRHGPVREALLTLLD
ACGRPVPSSPALDEGLVLLLSQLCVCVAQEPSLLEFFLQPPPEPGAAPRLLLFSRLVP
FVHREGTLGQQARDALLLLMALSAGSPTVGRYIADHSYFCPVLATGLSALYSSLPRKI
EVPGDDWHCLRREDWLGVPALALFMSSLEFCNAVIQVAHPLVQKQLVDYIHNGFLVPV
MGPALHKTSVEEMIASTAYLELFLRSISEPALLRTFLRFLLLHRHDTHTILDTLVARI
GSNSRLCMVSLSLFRTLLNLSCEDVLLQLVLRYLVPCNHVMLSQKPAVRDVDLYGRAA
DKFLSLIPRCCRHHAPSPPRPEHASWARGPGSPSVDSSSVTTVPRPSTPSRLALFLRQ
QSLGGSESPGPAPCSPGLSASPASSPGRRPTPAEEPGELEDNYLEYLREARRGVDRCV
RACRTWSAPYDGERPSPEPSPFGSRTKKRSLLPEEDRNNVGEGEEEELGRRGRAGGAG
EGPGHLPPPQLNGVPGSWPEGAKKVRLVPKEGAGELLEGISEGMAGLEGFGQELRELE
VALSNGGTGSESPLEPPLPLEEEEAYESFTCPPEPPGPFLSSPLRTLNQLPSQPFTGP
FMAVLFAKLENMLQNSVYVNFLLTGLVAQLACHPQPLLRSFLLNTNMVFQPSVKSLLQ
VLGSVKNKIENFAASQEDFPALLSKAKKYLIARGKLDWAEGPAAGPAPRRSDPLVKSR
RPSLGELLLRHAHSPTRARQAAQLVLQPGRDGAGLGLSGGSPGASTPVLLTRGGAPER
QGEALRVKNAVYCAVIFPEFLKELAAISQAHAVTSPFLLETSEEGSGPLISGCGPLNP
"
BASE COUNT 633 a 1019 c 974 g 752 t
ORIGIN
1 gagaagcgat ggcggcggcc tgaactcacc taacaccgca gcagcaaccg ggcccggcca
61 ggttcggcgt tccgtgagtg aacgatttag aaatctggac tggccagtga cctctgggct
121 tgccattcca gcctggtata acctctggct ccatgggcag ctactggctc ctacagaccg
181 gatgaagcag actggagaca caagtggaga aaacctccag ctggcaaatc ctcagagtgt
241 aggcctctgg ctgccagtcc tgcccagcct tcatggagag gatgaattgg ctgagcagac
301 tggcctcccg gggccctggg caccgtatac ctcaaggggc caatctccaa accccagtca
361 tggctgatcc cgagacctgc ctcatggtct tcaagaatca ctggtcccag gtggtgcgaa
421 tcctggagcg gcaaggccct cgggcagctc ctgggggtgc agacgatctc agtgctgtgc
481 gcaaccacac ttaccagatg ttgacactgc tggcagagga ccgtgcagtt ccctcggccc
541 ccacaggccc tgggcccctg ctggagtttg ctctgcacga ggatctgctg acccgtgtgt
601 tgacatggca gctgcaatgg gatgagcttg gggatggggt cgaggaacgg cgggctgagc
661 aactgaaact atttgaaatg ctagtgagcg aagctcgcca gccactgttg cggcatggtc
721 cagttcgtga ggctctgctc accctgctgg atgcctgtgg ccgccctgtg cccagtagcc
781 cagcactgga tgaaggcttg gtgctacttc tcagccagct gtgtgtttgt gtggcccagg
841 agccttcatt gctcgagttc ttcctgcagc cacctcctga gcctggagcc gctccccgtc
901 ttcttctctt ttctcgcctt gtcccttttg tgcatcgaga gggcaccctg ggccagcagg
961 cccgtgatgc cctacttctt ctcatggctt tgtcagctgg gagccccact gtgggccgct
1021 acatcgcgga tcactcttac ttctgcccgg tgctggccac agggctcagt gccctgtact
1081 catcactgcc tcgaaagatt gaggttccag gggatgattg gcactgtctg cgacgggaag
1141 actggctggg agtgccagcc cttgcactct tcatgagttc cctggagttc tgcaatgcag
1201 taattcaggt ggctcacccc ctggtgcaga agcagttggt tgattatatc cataatgggt
1261 tcctggtgcc tgtcatgggt cctgccttgc acaagacctc tgtggaggag atgatcgcca
1321 gtaccgccta cctggaactt ttcctacgga gtatctcaga gcctgctttg ctccgtacct
1381 tcctgcgatt cctgttgttg caccggcatg acacccacac catcctcgac accctcgttg
1441 ctcgtattgg cagtaactcc cggctctgca tggtctctct gagtctcttc aggaccctcc
1501 tgaacctcag ctgtgaggat gtcctgctgc agctggttct caggtatctt gttccatgta
1561 accacgttat gctgagccag aagccggctg ttcgtgatgt ggacctatat ggacgagcag
1621 ctgacaagtt tctctcccta atcccacgct gttgtcggca ccacgccccc agcccacctc
1681 gtccagagca tgcctcatgg gcacgaggtc ctggaagccc aagtgtggac tcctcttctg
1741 tgacgacagt accccggccc tccacaccat ctcgtctggc tctcttcctg cggcagcaga
1801 gcctgggtgg ctctgagtct ccaggcccag ccccttgctc accagggctt tctgcatccc
1861 ccgcctccag ccctggccga cggcctaccc ctgcagagga gcctggagag ctggaagaca
1921 attacctgga gtatctgcgt gaggcacgtc gtggtgtgga ccgctgtgtc cgagcctgcc
1981 gtacctggtc tgccccctat gatggcgagc ggccctctcc tgagcccagt ccttttggct
2041 cccggactaa gaaacgcagc ctactgcctg aggaggacag gaacaacgtg ggggaagggg
2101 aggaggaaga gctggggagg agggggcggg ctgggggtgc aggggagggc cctggtcacc
2161 tgccccctcc ccagctcaat ggagtgccag gatcatggcc tgagggggcc aagaaggttc
2221 gtttggtgcc aaaggaggga gctggggaac tgctagaggg catctccgag ggcatggcag
2281 gactagaggg ctttgggcag gagctccggg agctagaggt ggcattgagc aatgggggaa
2341 ctggctcaga gtccccctta gaacctccac tgccccttga ggaggaggag gcctacgaga
2401 gcttcacctg tccccctgag ccccctggcc ccttcctcag cagccctttg cggactctca
2461 accagctgcc aagccagccc ttcactggcc ccttcatggc tgtgctcttt gccaaactcg
2521 agaacatgct gcagaactcc gtctatgtca acttcctgct gacggggctg gtggcccagc
2581 tggcctgtca cccccagccc ctgctccgct ctttcctgct caacaccaac atggtcttcc
2641 agcccagtgt caagtccctg ctgcaggtgc tgggctctgt gaagaataag attgagaact
2701 ttgcggcttc ccaggaggac ttcccagcac tgctgtccaa agccaagaag tacctcattg
2761 cccgtggcaa gttggactgg gctgagggcc ctgcagcagg acctgcccca cgccgttctg
2821 atcccctagt gaagagccgg aggccatcct tgggggagtt actcctgcgg catgcacaca
2881 gtccaaccag ggcccggcag gcggcacaat tggtccttca gcctgggcga gacggagcag
2941 gacttggcct aagtgggggc tcccctgggg cttcaactcc agttctactc acccggggcg
3001 gggcccctga acgccaaggt gaggctcttc gagtcaagaa tgctgtctac tgtgcagtca
3061 ttttccctga atttctcaag gagttggctg ccatctccca ggctcatgcc gtcacctcgc
3121 ctttcttgtt ggagacttca gaggaaggat ctggccctct catctcaggc tgtgggcccc
3181 tcaatcctta actttcttcc atggacaatc agggccatgg gtggcccggg ctggggctag
3241 ggcacaggct cctttttatg tttggaggca gtggcaaaag gactttttaa tttatttcag
3301 atgaatgttt tatggagaac ttgttgcaat atgtataaaa gggaaatctc tattctgtgc
3361 ccaaaaaaaa aaaaaaaa
//