LOCUS BC030777 2940 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens ubiquitin specific peptidase 16, mRNA (cDNA clone MGC:26265 IMAGE:4824914), complete cds. ACCESSION BC030777 VERSION BC030777.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2940) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2940) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC030777.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: j Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50312662. FEATURES Location/Qualifiers source 1..2940 /db_xref="H-InvDB:HIT000041126" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26265 IMAGE:4824914" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2940 /gene="USP16" /gene_synonym="UBP-M" /db_xref="GeneID:10600" /db_xref="HGNC:HGNC:12614" /db_xref="MIM:604735" CDS 159..2627 /gene="USP16" /gene_synonym="UBP-M" /codon_start=1 /product="ubiquitin specific peptidase 16" /protein_id="AAH30777.1" /db_xref="GeneID:10600" /db_xref="HGNC:HGNC:12614" /db_xref="MIM:604735" /translation="MGKKRTKGKTVPIDDSSETLEPVCRHIRKGLEQGNLKKALVNVE WNICQDCKTDNKVKDKAEEETEEKPSVWLCLKCGHQGCGRNSQEQHALKHYLTPRSEP HCLVLSLDNWSVWCYVCDNEVQYCSSNQLGQVVDYVRKHASITTPKPEKDNGNIELEN KKLEKESKNEQEREKKENMAKENPPMNSPCQITVKGLSNLGNTCFFNAVMQNLSQTPV LRELLKEVKMSGTIVKIEPPDLALTEPLEINLEPPGPLTLAMSQFLNEMQETKKGVVT PKELFSQVCKKAVRFKGYQQQDSQELLRYLLDGMRAEEHQRVSKGILKAFGNSTEKLD EELKNKVKDYEKKKSMPSFVDRIFGGELTSMIMCDQCRTVSLVHESFLDLSLPVLDDQ SGKKSVNDKNLKKTVEDEDQDSEEEKDNDSYIKERSDIPSGTSKHLQKKAKKQAKKQA KNQRRQQKIQGKVLHLNDICTIDHPEDSDNEAEMSLQGEVNIKSNHISQEGVMHKEYC VNQKDLNGQAKMIESVTDNQKSTEEVDMKNINMDNDLEVLTSSPTRNLNGAYLTEGSN GEVDISNGFKNLNLNAALHPDEINIEILNDSHTPGTKVYEVVNEDPETAFCTLANREV FNTDECSIQHCLYQFTRNEKLRDANKLLCEVCTRRQCNGPKANIKGERKHVYTNAKKQ MLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEENTRVL YSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHISDT HVQAVPTTKVLNSQAYLLFYERIL" BASE COUNT 1070 a 495 c 611 g 764 t ORIGIN 1 aggagtcact ctggcttcga ctccgtcgct ctcaattcgt caccaggagg aagacggagc 61 tggctgccca gcccaaaggc ccatgagggg atgcagttat gggctctgtc gccgtggatt 121 gttattttgt gtcagtaagt aatccataaa gtgccaacat gggaaagaaa cggacaaagg 181 gaaaaactgt tccaatcgat gattcctctg aaactttaga acctgtgtgc agacacatta 241 gaaaaggatt ggaacaaggt aatttgaaaa aggctttagt gaatgtggaa tggaatatct 301 gccaagactg taagactgac aataaagtga aagataaagc tgaagaagaa acagaagaaa 361 agccttcagt ttggctgtgt cttaaatgtg gccatcaggg ctgtggcaga aattctcagg 421 agcagcatgc cttgaagcac tatctgacgc caagatctga acctcactgt ctggttctta 481 gtttggacaa ctggagtgta tggtgttacg tatgtgataa tgaggtccag tattgtagtt 541 caaaccagtt gggtcaagtg gttgattatg tcagaaaaca tgccagcatt acaactccaa 601 agccagagaa agataatgga aatattgaac ttgaaaataa aaaattagaa aaagagagta 661 agaatgaaca agagagagaa aagaaggaaa acatggctaa agagaatcct cccatgaatt 721 ctccttgcca aataaccgtg aaaggactca gtaatttggg aaacacatgt ttcttcaatg 781 cagttatgca gaacttgtca caaacaccag tgcttagaga actactaaaa gaagtgaaaa 841 tgtctggaac aattgtaaaa attgaaccac ctgatttggc attaacagaa ccattagaaa 901 taaaccttga gcctccaggc cctcttactt tagccatgag ccagtttctt aatgagatgc 961 aagagaccaa aaagggggtt gtgacaccga aagaactctt ttctcaggtc tgtaaaaaag 1021 cagtgcggtt taaaggctat cagcagcaag acagccagga gctgcttcgc tacttattgg 1081 atgggatgag agcagaagaa caccaaagag tgagtaaagg aatacttaaa gcatttggta 1141 attctactga aaagttggat gaagaactaa aaaataaagt taaagattat gagaagaaaa 1201 aatcaatgcc aagttttgtt gaccgcatct ttggtggtga actaactagt atgatcatgt 1261 gtgatcaatg cagaactgtc tccttggttc atgaatcttt ccttgatttg tccctcccag 1321 ttttagatga tcagagtggt aagaaaagtg taaatgataa aaatctgaaa aagacagtgg 1381 aggatgaaga tcaagatagt gaggaagaaa aagataacga cagttacata aaagagagaa 1441 gtgatattcc ttctggaaca agtaagcact tacagaaaaa agcaaagaaa caagccaaaa 1501 agcaagccaa gaaccaacga agacaacaaa aaattcaagg aaaagttctt catttaaatg 1561 atatttgtac tattgaccat cctgaagaca gtgataatga agctgaaatg tcacttcaag 1621 gagaagtaaa tattaaatcc aaccatattt cacaagaggg tgttatgcat aaagaatatt 1681 gtgtcaacca gaaagatttg aatggccaag caaaaatgat cgaaagtgta actgacaatc 1741 aaaaatccac agaggaagta gatatgaaaa atatcaacat ggataatgat ctggaggttt 1801 taacatcttc tcccactagg aatttaaatg gtgcctacct aacggaaggg agcaatggag 1861 aagtggacat ttccaatggt ttcaaaaacc taaatttgaa tgctgctctt catcctgatg 1921 aaataaatat agagattctg aatgatagtc atactcctgg aacaaaggtg tatgaggttg 1981 taaatgaaga tccagaaact gctttctgta ctcttgcaaa cagggaagtt ttcaatactg 2041 atgagtgttc aatccaacat tgtttatatc agttcacccg taatgagaaa cttcgagatg 2101 cgaataaact gctttgtgaa gtatgcacac ggagacagtg taatggacca aaggcaaata 2161 taaaaggtga aaggaagcat gtttacacca atgccaaaaa gcagatgcta atttctcttg 2221 ctcctcctgt tcttactctt catttaaaga gatttcagca ggctggtttt aacctacgca 2281 aagttaacaa acacataaag tttccggaaa tcttagattt ggctcctttt tgcaccctta 2341 aatgtaagaa tgttgcagaa gaaaatacaa gggtactcta ttccttatat ggagttgttg 2401 aacacagtgg tactatgagg tcggggcatt acactgccta tgccaaggca agaaccgcaa 2461 atagtcatct ctctaatctt gttcttcacg gtgatattcc acaagatttt gaaatggaat 2521 caaaagggca gtggtttcac atcagcgaca cacatgtgca agctgtgcct acaactaaag 2581 tactaaactc acaagcgtac ctcctatttt atgagagaat actgtaataa tatcaaaagc 2641 actttttctg gaaacacatt tatggctttt ataatggctg aaataacgat aaaaaaaaga 2701 ctaattaaaa tcatgttcac ttaacattaa atacatgcca gaagaaatca tgtttattta 2761 aatattgaag ggaaaaatac ctaaaaatgt acaaaggttt tatattgtca tagtggtttt 2821 tattcctgct ttgtttctgg aaaggaaatc ctgaattact taagtacttt gtgtttaata 2881 tatctgggtg atggatcaca acacatcaat aaactgactt acccaaaaaa aaaaaaaaaa //