LOCUS BC030775 3292 bp mRNA linear HUM 04-DEC-2007
DEFINITION Homo sapiens endoplasmic reticulum aminopeptidase 1, mRNA (cDNA
clone MGC:26222 IMAGE:4824919), complete cds.
ACCESSION BC030775
VERSION BC030775.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3292)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3292)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: j Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20149636.
FEATURES Location/Qualifiers
source 1..3292
/db_xref="H-InvDB:HIT000041124"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26222 IMAGE:4824919"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3292
/gene="ERAP1"
/gene_synonym="A-LAP"
/gene_synonym="ALAP"
/gene_synonym="APPILS"
/gene_synonym="ARTS-1"
/gene_synonym="ARTS1"
/gene_synonym="ERAAP"
/gene_synonym="ERAAP1"
/gene_synonym="PILS-AP"
/gene_synonym="PILSAP"
/db_xref="GeneID:51752"
/db_xref="HGNC:HGNC:18173"
/db_xref="MIM:606832"
CDS 100..2925
/gene="ERAP1"
/gene_synonym="A-LAP"
/gene_synonym="ALAP"
/gene_synonym="APPILS"
/gene_synonym="ARTS-1"
/gene_synonym="ARTS1"
/gene_synonym="ERAAP"
/gene_synonym="ERAAP1"
/gene_synonym="PILS-AP"
/gene_synonym="PILSAP"
/codon_start=1
/product="ERAP1 protein"
/protein_id="AAH30775.1"
/db_xref="GeneID:51752"
/db_xref="HGNC:HGNC:18173"
/db_xref="MIM:606832"
/translation="MVFLPLKWSLATMSFLLSSLLALLTVSTPSWCQSTEASPKRSDG
TPFPWNKIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQI
SRATLRKGAGERLSEEPLQVLEHPRQEQIALLAPEPLLVGLPYTVVIHYAGNLSETFH
GFYKSTYRTKEGELRILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISN
MPLVKSVTVAEGLIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI
NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRESALLF
DAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHP
ELKVGDYFFGKCFDAMEVDALNSSHPVSTPVENPAQIREMFDDVSYDKGACILNMLRE
YLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASICPTDGVKGMDGFCSRSQHSSSSS
HWHQEGVDVKTMMNTWTLQKGFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVP
LTFITSKSDMVHRFLLKTKTDVLILPEEVEWIKFNVGMNGYYIVHYEDDGWDSLTGLL
KGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIP
MYKLMEKRDMNEVETQFKAFLIRLLRDLIDKQTWTDEGSVSERMLRSQLLLLACVHNY
QPCVQRAEGYFRKWKESNGNLSLPVDVTLAVFAVGAQSTEGWDFLYSKYQFSLSSTEK
SQIEFALCRTQNKEKLQWLLDESFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKN
WNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKENGSQLRCVQQTIET
IEENIGWMDKNFDKIRVWLQSEKLERM"
BASE COUNT 955 a 721 c 735 g 881 t
ORIGIN
1 agcgggctgg gcctcaggtg agactgcagc tccagtcatc atcttgattg cagcccacag
61 aaactaccaa cccacagaaa ctgtaggtag agcaagaaga tggtgtttct gcccctcaaa
121 tggtcccttg caaccatgtc atttctactt tcctcactgt tggctctctt aactgtgtcc
181 actccttcat ggtgtcagag cactgaagca tctccaaaac gtagtgatgg gacaccattt
241 ccttggaata aaatacgact tcctgagtac gtcatcccag ttcattatga tctcttgatc
301 catgcaaacc ttaccacgct gaccttctgg ggaaccacga aagtagaaat cacagccagt
361 cagcccacca gcaccatcat cctgcatagt caccacctgc agatatctag ggccaccctc
421 aggaagggag ctggagagag gctatcggaa gaacccctgc aggtcctgga acacccccgt
481 caggagcaaa ttgcactgct ggctcccgag cccctccttg tcgggctccc gtacacagtt
541 gtcattcact atgctggcaa tctttcggag actttccacg gattttacaa aagcacctac
601 agaaccaagg aaggggaact gaggatacta gcatcaacac aatttgaacc cactgcagct
661 agaatggcct ttccctgctt tgatgaacct gccttcaaag caagtttctc aatcaaaatt
721 agaagagagc caaggcacct agccatctcc aatatgccat tggtgaaatc tgtgactgtt
781 gctgaaggac tcatagaaga ccattttgat gtcactgtga agatgagcac ctatctggtg
841 gccttcatca tttcagattt tgagtctgtc agcaagataa ccaagagtgg agtcaaggtt
901 tctgtttatg ctgtgccaga caagataaat caagcagatt atgcactgga tgctgcggtg
961 actcttctag aattttatga ggattatttc agcataccgt atcccctacc caaacaagat
1021 cttgctgcta ttcccgactt tcagtctggt gctatggaaa actggggact gacaacatat
1081 agagaatctg ctctgttgtt tgatgcagaa aagtcttctg catcaagtaa gcttggcatc
1141 acaatgactg tggcccatga actggctcac cagtggtttg ggaacctggt cactatggaa
1201 tggtggaatg atctttggct aaatgaagga tttgccaaat ttatggagtt tgtgtctgtc
1261 agtgtgaccc atcctgaact gaaagttgga gattatttct ttggcaaatg ttttgacgca
1321 atggaggtag atgctttaaa ttcctcacac cctgtgtcta cacctgtgga aaatcctgct
1381 cagatccggg agatgtttga tgatgtttct tatgataagg gagcttgtat tctgaatatg
1441 ctaagggagt atcttagtgc tgacgcattt aaaagtggta ttgtacagta tctccagaag
1501 catagctata aaaatacaaa aaacgaggac ctgtgggata gtatggcaag tatttgccct
1561 acagatggtg taaaagggat ggatggcttt tgctctagaa gtcaacattc atcttcatcc
1621 tcacattggc atcaggaagg ggtggatgtg aaaaccatga tgaacacttg gacactgcag
1681 aagggttttc ccctaataac catcacagtg agggggagga atgtacacat gaagcaagag
1741 cactacatga agggctctga cggcgccccg gacactgggt acctgtggca tgttccattg
1801 acattcatca ccagcaaatc cgacatggtc catcgatttt tgctaaaaac aaaaacagat
1861 gtgctcatcc tcccagaaga ggtggaatgg atcaaattta atgtgggcat gaatggctat
1921 tacattgtgc attacgagga tgatggatgg gactctttga ctggcctttt aaaaggaaca
1981 cacacagcag tcagcagtaa tgatcgggcg agtctcatta acaatgcatt tcagctcgtc
2041 agcattggga agctgtccat tgaaaaggcc ttggatttat ccctgtactt gaaacatgaa
2101 actgaaatta tgcccgtgtt tcaaggtttg aatgagctga ttcctatgta taagttaatg
2161 gagaaaagag atatgaatga agtggaaact caattcaagg ccttcctcat caggctgcta
2221 agggacctca ttgataagca gacatggaca gacgagggct cagtctcaga gcgaatgctg
2281 cggagtcaac tactactcct cgcctgtgtg cacaactatc agccgtgcgt acagagggca
2341 gaaggctatt tcagaaagtg gaaggaatcc aatggaaact tgagcctgcc tgtcgacgtg
2401 accttggcag tgtttgctgt gggggcccag agcacagaag gctgggattt tctttatagt
2461 aaatatcagt tttctttgtc cagtactgag aaaagccaaa ttgaatttgc cctctgcaga
2521 acccaaaata aggaaaagct tcaatggcta ctagatgaaa gctttaaggg agataaaata
2581 aaaactcagg agtttccaca aattcttaca ctcattggca ggaacccagt aggataccca
2641 ctggcctggc aatttctgag gaaaaactgg aacaaacttg tacaaaagtt tgaacttggc
2701 tcatcttcca tagcccacat ggtaatgggt acaacaaatc aattctccac aagaacacgg
2761 cttgaagagg taaaaggatt cttcagctct ttgaaagaaa atggttctca gctccgttgt
2821 gtccaacaga caattgaaac cattgaagaa aacatcggtt ggatggataa gaattttgat
2881 aaaatcagag tgtggctgca aagtgaaaag cttgaacgta tgtaaaaatt cctcccttgc
2941 caggttcctg ttatctctaa tcaccaacat tttgttgagt gtattttcaa actagagatg
3001 gctgttttgg ctccaactgg agatactttt ttcccttcaa ctcatttttt gactatccct
3061 gtgaaaagaa tagctgttag tttttcatga atgggctatc gctaccatgt gttttgttca
3121 tcacaggtgt tgccctgcaa cgtaaaccca agtgttgggt tccctgccac agaagaataa
3181 agtaccttat tcttctcatt ttatagttta tgcttaagca cccgtgtcca aaaccctgta
3241 ccccatgttt atcattcata aactgtttca tcagccaaaa aaaaaaaaaa aa
//