LOCUS BC030696 3440 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens gamma-aminobutyric acid (GABA) A receptor, alpha 1,
mRNA (cDNA clone MGC:26564 IMAGE:4820972), complete cds.
ACCESSION BC030696
VERSION BC030696.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3440)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3440)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: a Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38327553.
FEATURES Location/Qualifiers
source 1..3440
/db_xref="H-InvDB:HIT000041105"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26564 IMAGE:4820972"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3440
/gene="GABRA1"
/gene_synonym="EJM"
/db_xref="GeneID:2554"
/db_xref="MIM:137160"
CDS 70..1440
/gene="GABRA1"
/gene_synonym="EJM"
/codon_start=1
/product="GABRA1 protein"
/protein_id="AAH30696.1"
/db_xref="GeneID:2554"
/db_xref="MIM:137160"
/translation="MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTR
ILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERL
KFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRL
TVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQY
DLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNR
ESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATV
NYFTKRGYAWDGKSVVPEKPKKVKDPLIKKNNTYAPTATSYTPNLARGDPGLATIAKS
ATIEPKEVKPETKPPEPKKTFNSVSKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLK
APTPHQ"
BASE COUNT 1155 a 640 c 634 g 1011 t
ORIGIN
1 agcggagcgg gcgagcaagg gagcgagcag gacaggagcc tgatcccaca gctgctgctc
61 cagcccgcga tgaggaaaag tccaggtctg tctgactgtc tttgggcctg gatcctcctt
121 ctgagcacac tgactggaag aagctatgga cagccgtcat tacaagatga acttaaagac
181 aataccactg tcttcaccag gattttggac agactcctag atggttatga caatcgcctg
241 agaccaggat tgggagagcg tgtaaccgaa gtgaagactg atatcttcgt caccagtttc
301 ggacccgttt cagaccatga tatggaatat acaatagatg tatttttccg tcaaagctgg
361 aaggatgaaa ggttaaaatt taaaggacct atgacagtcc tccggttaaa taacctaatg
421 gcaagtaaaa tctggactcc ggacacattt ttccacaatg gaaagaagtc agtggcccac
481 aacatgacca tgcccaacaa actcctgcgg atcacagagg atggcacctt gctgtacacc
541 atgaggctga cagtgagagc tgaatgtccg atgcatttgg aggacttccc tatggatgcc
601 catgcttgcc cactaaaatt tggaagttat gcttatacaa gagcagaagt tgtttatgaa
661 tggaccagag agccagcacg ctcagtggtt gtagcagaag atggatcacg tctaaaccag
721 tatgaccttc ttggacaaac agtagactct ggaattgtcc agtcaagtac aggagaatat
781 gttgttatga ccactcattt ccacttgaag agaaagattg gctactttgt tattcaaaca
841 tacctgccat gcataatgac agtgattctc tcacaagtct ccttctggct caacagagag
901 tctgtaccag caagaactgt ctttggagta acaactgtgc tcaccatgac aacattgagc
961 atcagtgcca gaaactccct ccctaaggtg gcttatgcaa cagctatgga ttggtttatt
1021 gccgtgtgct atgcctttgt gttctcagct ctgattgagt ttgccacagt aaactatttc
1081 actaagagag gttatgcatg ggatggcaaa agtgtggttc cagaaaagcc aaagaaagta
1141 aaggatcctc ttattaagaa aaacaacact tacgctccaa cagcaaccag ctacacccct
1201 aatttggcca ggggcgaccc gggcttagcc accattgcta aaagtgcaac catagaacct
1261 aaagaggtca agcccgaaac aaaaccacca gaacccaaga aaacctttaa cagtgtcagc
1321 aaaattgacc gactgtcaag aatagccttc ccgctgctat ttggaatctt taacttagtc
1381 tactgggcta cgtatttaaa cagagagcct cagctaaaag cccccacacc acatcaatag
1441 atcttttact cacattctgt tgttcagtcc tctgcactgg gaatttattt atgttctcaa
1501 cgcagtaatt cccatctgct ttattgcctc tgtcttaaag aatttgaaag tttccttatt
1561 ttcataattc atttaagaac aagagacccc tgtctggcag tctggagcaa agcagactat
1621 gcagcttgga gacaggattc tgacagagca agcgaaagag caaagtcatg tcagaaggag
1681 acagaatgag agagaaaaga gggggaagat ggttcaaaga tacaagaaaa agtagaaaaa
1741 aaaataacac ttaactaaaa cccctaggtc atttgtagat atatatttcc aaatattcta
1801 aaaaagatac tgtatatgtc aaaaatattt ttatgtgaag gtgtttcaaa gggtaaatta
1861 taaatgtttc atgaagaaaa aattttaaaa atctacgtct ttattacaca aactatggtg
1921 tgcttatgtt tttgttttgc tttttaaact gatgtatagc tttaacattt tgtttccaaa
1981 gctgaagatc cccattcttt ctctttgaaa aaaaaaaagg cctaatgcat tattttgtca
2041 taaaatgcta ttttaaaatt catggaactt tcatacgtaa aggtgcagtt gctcattgta
2101 gagcacattt agtccaatga agataaatgc tttaaatagt ttacttcact ttcatctgag
2161 cttttaccac tagactcaag gaagaataat tttaacagac atgtatactc catagaaact
2221 aaattaaaat agtttaaaaa tattcccttt ttcaccctat tttcagatag cacatgagcc
2281 caacactcac ttaattctca ttatgaagat gtttttagag gggcaaaaat attttgcaag
2341 ctctggaatt gttgaatgta ttcttttata taactacatt aaaagcttta gattgaaatt
2401 tatgactagc aaacaaaaat agaatatata aacgatatat gtaaatatac agcatgagat
2461 tgtacatttt ttactttttt aaaattgtgt tcttaaaata ttgtgtaaga atcactgcac
2521 ttagctgttg gaatgttgtt aaatgctatg gaaatacatt tagaacctgc atttaagaac
2581 agaacagcaa gtatgaacca catggaactt aaaacatatg ggtgtgaagt ccacttatgt
2641 agacaaaact tataatttcc aaactgttgt ctagtataca gtgatcagtt gctctctgtt
2701 caagtcattc cacacatttc cctattttag gctattataa tatagaaaga aaatgggaag
2761 cattagttgg agctagaaaa tgaactgtat attattgcta tatttgctaa taccaactat
2821 ttcaataagt gttgtaccat atgtagcatt aaatataaaa tacataaaag aatgtacaga
2881 aaatagcttt tattgagtaa tattacattt catttatact gtagcaatat atttgtaggt
2941 atactatgta agggctttaa ataaaagagg tccattaata cttccttata aaaattctag
3001 tctgtttcat tactgcccag atgttttaga gataaatatt tatgcagaag gtatttttga
3061 agtctccttt tgtctgatag agtttaacag atatttaaat ttagtgctca gaatccacaa
3121 gtcacggtct aaacacactt agaatactac agcataaatc tgttagcatt attgccaaat
3181 aagacagttg ggatccaaac ccaagtcttg agcaatgttt ttctcaaaaa gctgctatcc
3241 aatgatatag gaaaatacat tgtgttttcc taaacacact tttcttttta aatgtgcttc
3301 attgtttgat ttggtcctgc ctaaatttca caagctaggc caatgaaggc tgaatcaaag
3361 acatttcatc caccaatatc atgtgtagat attatgtata gaaaataaaa taaattatgg
3421 ctccaaaaaa aaaaaaaaaa
//