LOCUS BC030691 4823 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1, mRNA (cDNA clone MGC:26308 IMAGE:4821322), complete cds. ACCESSION BC030691 VERSION BC030691.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4823) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4823) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (24-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC030691.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: b Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 15451924. FEATURES Location/Qualifiers source 1..4823 /db_xref="H-InvDB:HIT000041102" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26308 IMAGE:4821322" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4823 /gene="SPOCK1" /gene_synonym="TESTICAN" /db_xref="GeneID:6695" /db_xref="HGNC:HGNC:11251" /db_xref="MIM:602264" CDS 133..1452 /gene="SPOCK1" /gene_synonym="TESTICAN" /codon_start=1 /product="sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1" /protein_id="AAH30691.1" /db_xref="GeneID:6695" /db_xref="HGNC:HGNC:11251" /db_xref="MIM:602264" /translation="MPAIAVLAAAAAAWCFLQVESRHLDALAGGAGPNHGNFLDNDQW LSTVSQYDRDKYWNRFRDDDYFRNWNPNKPFDKALDPSKDPCLKVKCSPHKVCVTQDY QTALCVSRKHLLPRQKKGNVAQKHWVGPSNLVKCKPCPVAQSAMVCGSDGHSYTSKCK LEFHACSTGKSLATLCDGPCPCLPEPEPPKHKAERSACTDKELRNLASRLKDWFGALH EDANRVIKPTSSNTAQGRFDTSILPICKDSLGWMFNKLDMNYDLLLDPSEINAIYLDK YEPCIKPLFNSCDSFKDGKLSNNEWCYCFQKPGGLPCQNEMNRIQKLSKGKSLLGAFI PRCNEEGYYKATQCHGSTGQCWCVDKYGNELAGSRKQGAVSCEEEQETSGDFGSGGSV VLLDDLEYERELGPKDKEGKLRVHTRAVTEDDEDEDDDKEDEVGYIW" BASE COUNT 1349 a 1137 c 989 g 1348 t ORIGIN 1 acggagcggc cagacgctcg gcggcggcgt gtggcaggag cgcaggggcg cgagccggcg 61 atcagccttc ccggcgaccg tgccgcggga gctcgagcaa ctcggactag gggacccggg 121 ccggccccca agatgccggc gatcgcggtg ttggcggcgg ccgccgcggc gtggtgcttc 181 ctccaagtcg agagccggca cctggacgcg ctcgccggag gcgcgggccc caaccacggc 241 aatttcctag acaatgacca gtggctgagc accgtctccc agtacgaccg ggacaagtac 301 tggaaccgct ttcgagacga tgattatttc agaaactgga atcccaacaa gccctttgac 361 aaagccctgg acccatccaa ggacccctgc ctgaaggtaa aatgcagccc tcacaaagtg 421 tgtgtgaccc aggactacca gaccgccctg tgtgtcagcc gcaagcacct gctccccagg 481 caaaagaagg ggaacgtggc ccagaaacac tgggttggac cttcgaattt ggtcaagtgc 541 aagccctgtc ccgtggcaca gtcagccatg gtctgcggct cagatggcca ctcctacaca 601 tccaagtgca aattggagtt ccatgcttgt tctactggca aaagcctcgc caccctctgt 661 gatgggccct gtccctgtct cccagagcct gagccaccaa agcacaaggc agaaaggagt 721 gcctgcacag acaaggagtt gcggaacctt gcctcccggc tgaaggattg gtttggagct 781 ctccacgagg atgcgaacag agtcatcaag cccaccagct ccaacacagc ccaaggcagg 841 tttgacacta gcatcctgcc catctgcaag gactccctgg gctggatgtt caacaagttg 901 gacatgaact atgacctcct gcttgaccct tcagagatca atgccatcta cctggataag 961 tacgagccct gtatcaagcc tcttttcaac tcgtgtgact ccttcaagga tggcaagctt 1021 tctaacaatg agtggtgcta ctgcttccag aagcctggag gtctcccttg ccagaatgaa 1081 atgaacagaa ttcagaagct gagtaagggg aaaagcctgt tgggggcctt catacctcgg 1141 tgtaatgagg agggctatta caaagccaca cagtgccacg gcagcacggg gcagtgctgg 1201 tgtgtggaca aatatgggaa tgagttggct ggctccagga aacagggtgc tgtgagctgt 1261 gaagaggagc aggaaacctc aggggatttt ggcagtggtg ggtccgtggt cctgctggat 1321 gacctagaat atgaacggga gctgggacca aaggacaaag aggggaagct gagggtgcac 1381 acccgagccg tgacagagga tgatgaggat gaggatgatg acaaagagga tgaggtcggg 1441 tacatatggt agtgcccaca agaaagagga cacaagtttt gcacaaaatt gcaagtcact 1501 tcctattcct gcatttgtat ctaagactcc aaggcaccaa ggtctcttct ccattgttgc 1561 tctctatacc cgacctaagg tttggaagac aactgcttgt tcccagagga ttctgatttt 1621 gcatatgttt gtatgggaga aagggtgttg tgtttttttt tttgttgttg tttatttttt 1681 ggatagggaa gtcattggct taattagagc ctccttcctt tctgtgagat ttttccaaca 1741 agcatgtgat ttacgtggaa ttctgacagt gcagggagcc cccaccctct taaatgtcaa 1801 agaccctttt tgattaccca cactggtggt tattacagca tggttcccag ccttacagtg 1861 tctaagtgct tctcttgtgt cctgtagatg ttgtgaaaaa gaaaaaaaca aaaaatacac 1921 cacactgtac tttttccccc tgcccccgtt actgccggtg attattatta aaaattagtt 1981 tttttcacat cattatatct ggcttcctat aaacaacagc cttaattcag tcaagactcc 2041 ctttggggaa ttcattttat taaaaattgg tgtctggata cttccctgta catgcataaa 2101 tatgcatgca tgtacagaaa gactgtatgt gtgtgccttg cacacacacc catacctctc 2161 agaaaaagtg tttgggtatc ttaaaaactc gaaaaacaat gataaatttc tcagcttgtc 2221 cagacctgga acaaaatttc tggaataaga aatttgtatt aaagtccttt tttgcactaa 2281 cagttggctc ttgtagcctg caggctgagg aagtctcttc tctgtgcatc agcagagtta 2341 ctgaaagcct ctgattgaga aaaaacctcc gtctgcctaa atcacttttc tcgcagaagc 2401 catgcgactc ccacacgaca cgggcagctt cacaagccat ctctttcatt tctgcttgaa 2461 gcccccttgg ctgcagcaat cctgtctgcc ataggtttct tccttcctta cctactcaag 2521 ggctttttct aaggcatgca cacatatctc ctgttctctg agagtaccat ggtgttcctt 2581 aaaagaagaa aatttctaat tctgaactca atgttttgct tttactcccc ttctactgac 2641 aaatcatgat aagggcacaa aagctgtaca gatttttttt tttaaccact caatcccaaa 2701 tggaggccta caaagaacat cgtaataaca catggaggca aaccctgggt ttttaagagc 2761 aaattctgtc ccccctcact cccccaagtg acaagatact aatgaagaaa gttcttgacc 2821 atagtgtttg ttttaactaa actcattgga gtctagttcc agatttggta gggtcatcat 2881 ctctacattc cttaggattt ctctccctat caagctggcc cagatacaag taccaaacag 2941 tagtctctga agttccccca tttccttcag taccagtcta taagctactg tccgccactg 3001 attttcatct atcagggtgt cctaatcaga atcagccacc caagcaagcc tctctggccc 3061 acatatctat ctcttgcctt cccccatgaa cttcagcctg tccacacaaa agccacataa 3121 actcaagcaa gaaatatgtt cagccaaaac atgattatag tggcagctga ccaatccccc 3181 atcccaaatt gaccatttag atgtaccaac tcaccttaaa ttagcatgtt ccaatccagt 3241 cggcattgcc tgaatacagt agcatcatac ctatagttgg tcttagataa gaaatgaact 3301 acttgatata gcaaagtcct ttggcttcgt aaataaccct gaggttttgt acttactttc 3361 cccataggaa gacagaccat aggcaaactc tgttttggga tctcaactcc atcacctttg 3421 tttcaatatt ttttttctct cttgaacaaa actgagataa tttagaaaac aggtgcttaa 3481 ttgcaataaa attactatga agtatattaa aaatcacgac attgtaaaat ctcactttag 3541 atcatcaaag aaaaccattg ttactatctc ctttgagctt aggaaaatgt acaagagaac 3601 aaattaaaat tgaaaaattg atttcactta gaaaaacttc taggaacagg gtgaaccact 3661 gattttaatt tgcctaatta tcttatgaca agtatcaaat taagatgaca cttaaagatc 3721 cttagcatta acttaatgat ggagaagagt gctcaacaga cagttcccag taaggtaatg 3781 agatgccatt ttcagagaca ttctaagaag atattttgat tcattaaaac attaaataaa 3841 aagccctcct cagattggaa cccccaaatc gatggagcca cattaataat acttttcatg 3901 cctcactttg acatgacagc attcgatttt tttaaagatc tttaatactt tccatgagta 3961 ctaaagattg taatgagtta ccttatcctt agaagtagaa tgtttgcttt cttcttcttg 4021 gaaatagtcc tccaaaaagt ccacttgtac cagtgacaag aagtcacttg tatagtgacc 4081 aagtacacat aaaatactga ttataaaaat attgtaataa accacttcct catttgatac 4141 aggtattaag ctgaatcctc actaattcac ttttgaaaag ttcttaatga acagttttat 4201 tcttattcca tgaacagctc ttttaataca atttccttgg tatccaactt aaatcccaga 4261 attttgttcc accatggtta gttatttgcc atatgaatgt attcttgttt ctaccaatat 4321 tctaggcatg agaatacctt aatactgagt tggagatttt gtatctgttt ctcctccttt 4381 acgcccattt tcctacccac agcagcaaat gacaacgtgt ctgtccaggt ctgtccccct 4441 gctcatccct ggatgccact cacatttttt tcttcttgtt accttgacca cgctgtacag 4501 taacatccaa gagcccattc tacagtgggt ggttttggtc tttttataac tttttctcaa 4561 agtcactgat gtttgttcct gttaaatgta tagcattgta atgagagcac atcaaatcct 4621 gagtgtcagt ttgttgtccc tattgtagat gaaatagtga tgtagcaaaa acctagtaaa 4681 ttctgaatgc ttttccacgt agacttatct ggaatgtgaa cacaactctt tggttaatag 4741 taaatgctta actgtagtcc tgagtaggtg catttctgtc tgtctcaata aattttactt 4801 tgtctgcaaa aaaaaaaaaa aaa //