LOCUS BC030651 2995 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens ATP/GTP binding protein-like 3, mRNA (cDNA clone
MGC:32955 IMAGE:5267615), complete cds.
ACCESSION BC030651
VERSION BC030651.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2995)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2995)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC030651.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: l Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42558242
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..2995
/db_xref="H-InvDB:HIT000050998"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32955 IMAGE:5267615"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2995
/gene="AGBL3"
/db_xref="GeneID:340351"
/db_xref="HGNC:HGNC:27981"
CDS 229..2094
/gene="AGBL3"
/codon_start=1
/product="AGBL3 protein"
/protein_id="AAH30651.1"
/db_xref="GeneID:340351"
/db_xref="HGNC:HGNC:27981"
/translation="MSEDSEKEDYSDRTISDEDESDEDMFMKFVSEDLHRCALLTADS
FGDPFFPRTTQILLEYQLGRWVPRLREPRDLYGVSSSGPLSPTRWPYHCEVIDEKVQH
IDWTPSCPEPVYIPTGLETQPLYPDSKEATVVYLAEDAYKEPCFVYSRVGGNRTPLKQ
PVDYRDNTLMFEARFESGNLQKVVKVAEYEYQLTVRPDLFTNKHTQWYYFQVTNMRAG
IVYRFTIVNFTKPASLYSRGMRPLFYSEKEAKAHHIGWQRIGDQIKYYRNNPGQDGRH
YFSLTWTFQFPHNKDTCYFAHCYPYTYTNLQEYLSGINNDPVRSKFCKIRVLCHTLAR
NMVYILTITTPLKNSDSRKRKAVILTARVHPGETNSSWIMKGFLDYILGNSSDAQLLR
DTFVFKVVPMLNPDGVIVGNYRCSLAGRDLNRNYTSLLKESFPSVWYTRNMVHRLMEK
REVILYCDLHGHSRKENIFMYGCDGSDRSKTLYLQQRIFPLMLSKNCPDKFSFSACKF
NVQKSKEGTGRVVMWKMGIRNSFTMEATFCGSTLGNKRGTHFSTKDLESMGYHFCDSL
LDYCDPDRTKYYRCLKELEEMERHITLEKVFEDSDTPVIDITLDVESRELTFLLR"
BASE COUNT 994 a 598 c 624 g 779 t
ORIGIN
1 ggctgatgac gagagttggg agtgtggctg gggctgcgga tctccagcag tggcgttact
61 tctagcggct ggataccggg ttctccgcga gatcccgaga tattctcccc gcacggaagc
121 gacgactggc ctggccagag gactcgcgtg ggagcgaggt gccggccccg acaggacggt
181 gagcctaccc gtatattaca agaaatctca agtcaaacac tggaaaagat gtcagaagat
241 tcagaaaagg aagactattc agacagaaca atcagtgatg aagatgaatc ggatgaggat
301 atgttcatga aatttgtaag tgaagatctt catcggtgtg cacttttaac agctgactct
361 tttggtgatc ccttcttccc ccggactaca cagatactat tagaatatca gctagggaga
421 tgggtgccac gtcttcgtga accaagggat ttatatggtg tctcttcttc tggtccattg
481 agcccaacac ggtggccata ccattgtgaa gtcatcgatg aaaaagtcca gcatattgat
541 tggactcctt cttgtcctga gccagtgtat atcccaacgg gcttagaaac gcaacccctt
601 tatccagact ccaaggaagc tactgtggtt tatctagctg aagatgctta caaagagccc
661 tgttttgtgt attcccgagt tgggggtaac cgaacacctt tgaagcagcc tgtggattac
721 cgtgacaata ctttgatgtt tgaagcaagg tttgagagtg gtaatctaca gaaggtagtc
781 aaagtggcag aatacgaata ccaattgact gtacgccctg acctcttcac aaataaacac
841 acccagtggt actatttcca agtcactaat atgcgagcag gaatagtcta cagattcact
901 attgtcaact tcaccaaacc tgctagtctt tacagtcggg gtatgcgccc actgttctat
961 tctgaaaaag aggccaaggc tcatcacatt ggctggcaga gaataggaga ccaaatcaag
1021 tattatagga acaacccagg ccaagatggg cgccattatt tctctcttac atggacattt
1081 caatttccac acaacaaaga tacctgctac tttgctcatt gctatccata cacttacacc
1141 aacctgcaag aatacctttc tggcatcaat aatgatccag tacggtcaaa gttttgtaaa
1201 atacgtgttt tgtgccacac gcttgctagg aacatggtgt atattttaac aatcactacc
1261 cccttgaaga actctgactc aagaaagcgg aaggctgtga ttctgactgc aagggtccat
1321 ccaggggaaa ccaacagctc ttggatcatg aaaggcttcc tagattatat tttaggaaac
1381 tcaagtgatg cacagttgct tcgggacact tttgtcttca aggtggtacc catgctgaat
1441 ccagatggtg tgattgtggg aaattatcgc tgttccttag ctggacggga tttaaaccgt
1501 aattatacat ctctcctgaa ggaatctttt ccttctgtat ggtatacccg gaacatggtt
1561 catagactga tggagaaacg agaggttata ttatactgtg atcttcatgg ccatagtagg
1621 aaagagaaca tcttcatgta tggctgtgat ggtagtgaca gatctaagac attatactta
1681 cagcaacgaa tcttcccact tatgctaagc aaaaattgtc cagataaatt ttcattctca
1741 gcttgcaagt ttaatgtcca gaagagcaaa gaaggaacag gaagggtggt aatgtggaaa
1801 atgggaatca ggaacagctt taccatggag gccaccttct gtggatctac tctgggtaac
1861 aaacgaggca ctcatttcag cacgaaagac ctggaatcaa tgggatatca tttttgtgat
1921 tctctcttgg attattgtga tcccgaccgg accaagtatt atcggtgcct gaaagaatta
1981 gaagaaatgg aaagacatat aaccctggaa aaagtctttg aggattcaga cacacctgtg
2041 atagacatta cattggatgt agagtctaga gaactgacat ttttattgag atgacacaaa
2101 agcagtataa taaaaggtaa tgaataataa ctggaaaatt caatgccaca ggaatatagt
2161 tggaagaaag aatgtactaa ttttataagc tcccacttat agtagccgag gctctgacag
2221 ttcagaatcc attgactctc tgacttacct tctcaagtta acttctcaga aaaaacattt
2281 gaaaacaaag aaggaaagga attctaccat agcaagccac caaaatgcca gaggacaaga
2341 ggtttatgat agagggcatt tgctgcaaag acacacacaa tcaaattctg atgtgaaaga
2401 tacaaggcca aatgaaccag atgattatat ggttgattat ttcagaagac aattacctaa
2461 tcaaggtttg gatctgcacc acaacttaaa aagcaaaata aaagaatgca tatctttcca
2521 aagcaagaag actggcataa attggacaga tgatgaaaaa agaagctaca aggataaagg
2581 aatagttcaa actcaagaaa tattgcagta tttgctcccc atcgtgcata gcactaaaaa
2641 catgcaaacc actcagataa aacagctatt caatccaaga accaacttcc aaatccaaca
2701 tcagtaagtc aatacaattt tatcactctt atctatttaa cacatctttt ttaaaaaagc
2761 agggcttatt aatttattat cctacgaaaa aaaaatctgc tcttgaaaat gatgtcagct
2821 ccatcacatt tggcaaagaa caaagaccca aagctgtcag aaaacactgg ataaatgaag
2881 gagtaagtta tcaggcctta tttaattgat tatttgcatg aaactactca ttaatttaga
2941 tctattaata aagtaggcat aaataaaaaa aaaaaaaaga aaaaaaaaaa aaaaa
//