LOCUS BC030642 1348 bp mRNA linear HUM 25-JAN-2007
DEFINITION Homo sapiens PARK2 co-regulated, mRNA (cDNA clone MGC:26712
IMAGE:4823539), complete cds.
ACCESSION BC030642
VERSION BC030642.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1348)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1348)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC030642.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: g Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22748868.
FEATURES Location/Qualifiers
source 1..1348
/db_xref="H-InvDB:HIT000041083"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26712 IMAGE:4823539"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1348
/gene="PACRG"
/gene_synonym="GLUP"
/gene_synonym="HAK005771"
/gene_synonym="PARK2CRG"
/gene_synonym="RP3-495O10.2"
/db_xref="GeneID:135138"
/db_xref="HGNC:HGNC:19152"
/db_xref="MIM:608427"
CDS 237..1010
/gene="PACRG"
/gene_synonym="GLUP"
/gene_synonym="HAK005771"
/gene_synonym="PARK2CRG"
/gene_synonym="RP3-495O10.2"
/codon_start=1
/product="PARK2 co-regulated"
/protein_id="AAH30642.1"
/db_xref="GeneID:135138"
/db_xref="HGNC:HGNC:19152"
/db_xref="MIM:608427"
/translation="MVAEKETLSLNKCPDKMPKRTKLLAQQPLPVHQPHSLVSEGFTV
KAMMKNSVVRGPPAAGAFKERPTKPTAFRKFYERGDFPIALEHDSKGNKIAWKVEIEK
LDYHHYLPLFFDGLCEMTFPYEFFARQGIHDMLEHGGNKILPVLPQLIIPIKNALNLR
NRQVICVTLKVLQHLVVSAEMVGKTLVPYYRQILPVLNIFKNMNVNSGDGIDYSQQKR
ENIGDLIQETLEAFERYGGENAFINIKYVVPTYESCLLN"
BASE COUNT 369 a 328 c 295 g 356 t
ORIGIN
1 ggaagcttgt tgcagctcta gccaaggtcc tgccctcttc ccgccccgcc cctagggtcc
61 agctcccttc acctaggagc tgccaaacat ctggatcaac ctgggcacta cgaggggttg
121 aatttctacc attatcgcgc cttttgatat ttttttccag acctcctgct cacatccgta
181 aagcccactg attcttttac tacacttttt atgagaacaa gacattttct aggaagatgg
241 tggcagaaaa agagaccctg agcttaaaca aatgcccaga caagatgccg aagaggacca
301 agctgctggc acaacagccg ctcccggtgc accagcctca ctctctggtt tctgagggtt
361 tcacagtcaa agccatgatg aaaaactcag tcgtgagagg ccctccagct gcaggggcat
421 ttaaagaaag accaaccaag cccacagcat ttcgaaaatt ctatgagcga ggtgacttcc
481 caattgccct tgagcatgat tcgaaaggaa acaaaatcgc ctggaaggta gaaattgaga
541 agctggatta ccatcattat ctgcctctgt tttttgatgg gctttgtgaa atgacatttc
601 cctatgagtt ttttgctcgg caaggaatcc acgacatgct ggaacacggt gggaacaaga
661 tcctacctgt ccttccacag ctcattatcc cgataaaaaa tgccttgaac ctccgaaacc
721 gacaggtcat ctgtgtcact ctcaaggtcc tccagcatct ggttgtgtca gctgagatgg
781 tgggcaagac cttggtgcct tattaccgtc aaatcctccc tgtcctgaac atctttaaga
841 atatgaatgt gaactccgga gacggcattg actacagcca gcagaagagg gagaacattg
901 gggacttgat ccaggagaca ctggaggcct tcgagcgcta cggaggagaa aatgccttta
961 tcaacattaa gtacgtggtc ccaacctacg agtcttgctt gctaaactaa cagtggcagc
1021 agctgggact tgaaacctcc cgttggtgtt gggatcatct gtctctgttg cttttagcat
1081 ctcattcctt gtgacttcca cagctttctt ttctacagct gctaaaatag tggcttatgg
1141 gccattggac tgttagccct attgagagca aggctttcca atacataaat agtgtctgtt
1201 tcttagatta caatagtgta ctgtgcttat ttgttctaag agaagaattg cttctttata
1261 cagctccgac agaagcagga gtccgagtta aaccttcagt tgtatagaca ataaactata
1321 attttcatat gcaaaaaaaa aaaaaaaa
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