LOCUS BC030620 2936 bp mRNA linear HUM 18-DEC-2008
DEFINITION Homo sapiens non-protein coding RNA 86, mRNA (cDNA clone
IMAGE:4813443).
ACCESSION BC030620
VERSION BC030620.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2936)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2936)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: d Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2936
/db_xref="H-InvDB:HIT000092175"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4813443"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 532 a 893 c 947 g 564 t
ORIGIN
1 agcgggggct gtgcgggatc gtggaggtgg ggccgaggca gcggccgcct gagccccgct
61 cggccttggg aacacggggg cggggcggcc gcggctctgg gcgacccgct gggtgcacta
121 gtgctcgggt cccaccgccc tgaggctcgc gctcgagcgg gtcagtcggt cggcggggcc
181 tgcgcggggc ccgggcccat ggcggcgtcg gcggctctgt ctgcagcggc ggctgcggcg
241 gccctgtctg gcctggcggt gcggctgtcg cgctcagctg cggcccgagg ctcgtacggc
301 gccttctgca aggggctcac gcgcacgctg ctcaccttct tcgacctggc ctggcggctg
361 cgcatgaact tcccctactt ctacatcgtg gcctcggtga tgcttaacgt ccgcctgcag
421 gtgcggatcg agtgagcgcc ggcggcggcg gcggcgaagg cccggctgaa ggggcgcccg
481 tgtccccgcc cgcccccggc cgggtcgccg gcatgaagga aagctgggcc gcggcggggg
541 gcggaggcgg ggcggctcgg acccctggac tctagaccta cgccgccagg gcacgacggc
601 gcagccctgg ccccggctgc ggtctcagcc cgggggccct ggatcgcgca gaaacgcact
661 gaatgggccc ctgccatcgg gctccagaaa ctacctgggc tcggccgacc tgttgcctca
721 tattggccaa agagggggaa accagaagga gggaattctg ctgcggcgac ttgactttcc
781 aggcccggag cagaaaggca ttggcatttg taggcggtga cccgcccctt ctctggcctt
841 gccaagagtc acatccctgc ccaggggcac ctctggccct ggaacttgcc tgggcagagg
901 cagcgtgaag ggcctgaaca agaggagaag aagggccttc ctagtagagg cacagcatgg
961 acaaaggctc acaggggtgg gggtgcccag tgatcgagtc ctggcttggg aaggaaggtc
1021 tgagttccct aggaactgaa atctgctagc agcactgtga gagaggtgta tttcgccctc
1081 ctaatgacag aggaaactga ggcttcaggg aggggtggat ttgcccttga catgcagata
1141 ggaggaggag gaactgcgtg tgcccctggg cctgcaggcc cccacaccca tccccagtct
1201 tcttcaagac ctggcatggt gggaggaggg agggggaagt ggagagggga gcatagggct
1261 cctggggcac caagggagag aggggcccag gggtagggaa tctaggaatg tcgctttcct
1321 tggagcagta cggaaagtca cagggaagat caggaggacg gacagctgag atgggagaca
1381 ggagagatga gccccaggac ccctggggag ccaagctgtc ccccacatcc tagcctctca
1441 ccccacctgg agcttcacca agggctcctc agcagtgaag tggcacaagc ctcccagttt
1501 ggtgggcaag tgggggtgat cttggtgttg tggctcctgg agacacgaca taaccaggag
1561 ggtgaaggga taaacctggg gtgggctggg gctgagaccc atggcatgac cccaattctc
1621 tctcctcaag ctcgaccccc catccccagg atcacacagg agaatctcat cctcacggct
1681 tggattgctc ctgggggccc cctggtgtgc tgctaactgg tgtacaatgc tcaggagcag
1741 cccagagggg agccgggaag ggaccctcgc ccttaccatc tatccccatt tccgcatctc
1801 ttgcactggt accccgggcg ccacgttctc agttcctggg actgaaaact gcagcagtct
1861 ggccagctcc agggacagag tggcccagcc acctactatg taccctcctc agctgcccac
1921 tggactcagg tcctgaatga agctgtccgc ctgcctcatg ccagaagcgg ctggacagtg
1981 gctgcctcat gacccttgca gtctcccaca tccagggcct gatgacatgc ccccttgtcc
2041 caagtttctt gggaacccct gaccctgctg gcccctctca tccaccccaa ccctatccac
2101 cctggaccac ctctgggggt ctgtcagcct gctggtcccc ccaacagatc tttgggggca
2161 gcctctatgg gacaagagtg acacagggct ggagaagagg agtgaggagc ctccttgtgt
2221 ctgatgcaca gatgtggccc tttcaaaccc tggtgtcacc ctctgggtga ctggatcccc
2281 agctccagcc tcttcctggg ccagccagga aggctggagg aaagctcttt gctgagtgca
2341 tgcatgggag tgtggggggt gactgagccc tccccatgca aggggcttgg cctgggaccc
2401 tggaagctgt ttccctactg ggataaagtt gcgtcagccg caggggtctc tgccctcaga
2461 gaccccccac tgcagggagc cccaccccat aagagggtca cggaagtcca tgtccgccca
2521 cccccagtgg cttctggtgt ggccgtattg gcctagaggg gctgactggg gagggtcagg
2581 gccaagccct cagcatctgc tcctgtccct gctttttcac ccctgctgcc tgaagtggta
2641 gccccgcctg ctgcttctcc acctcccctc cccacctctt ctctcccaga tggggccctt
2701 gctgcgtgac ggggtctcca tgcgctttat ttatttgcag tctgttttct aggcggtgga
2761 gctagacact gaccggaatg acatactttt ctgtgtgtga ttcactgtgt actggtcagc
2821 acaggctggc cagagagctg ttcttgtttc tggtgttgtc acgtcttctt gttttctcta
2881 agtttaaaaa aaagtccttg gtttaataca ctaaaatccc aaaaaaaaaa aaaaaa
//