LOCUS BC030608 3020 bp mRNA linear HUM 30-JAN-2008 DEFINITION Homo sapiens podocan, mRNA (cDNA clone MGC:26993 IMAGE:4826932), complete cds. ACCESSION BC030608 VERSION BC030608.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3020) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3020) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC030608.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: p Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 45505136. FEATURES Location/Qualifiers source 1..3020 /db_xref="H-InvDB:HIT000092169" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26993 IMAGE:4826932" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3020 /gene="PODN" /gene_synonym="PCAN" /gene_synonym="SLRR5A" /db_xref="GeneID:127435" /db_xref="HGNC:HGNC:23174" /db_xref="MIM:608661" CDS 10..1995 /gene="PODN" /gene_synonym="PCAN" /gene_synonym="SLRR5A" /codon_start=1 /product="podocan" /protein_id="AAH30608.1" /db_xref="GeneID:127435" /db_xref="HGNC:HGNC:23174" /db_xref="MIM:608661" /translation="MEGARARGAQLRLGERVRPVGRRSAPGRSRFHQPWRPGASDSAP PAGTMAQSRVLLLLLLLPPQLHLGPVLAVRAPGFGRSGGHSLSPEENEFAEEEPVLVL SPEEPGPGPAAVSCPRDCACSQEGVVDCGGIDLREFPGDLPEHTNHLSLQNNQLEKIY PEELSRLHRLETLNLQNNRLTSRGLPEKAFEHLTNLNYLYLANNKLTLAPRFLPNALI SVDFAANYLTKIYGLTFGQKPNLRSVYLHNNKLADAGLPDNMFNGSSNVEVLILSSNF LRHVPKHLPPALYKLHLKNNKLEKIPPGAFSELSSLRELYLQNNYLTDEGLDNETFWK LSSLEYLDLSSNNLSRVPAGLPRSLVLLHLEKNAIRSVDANVLTPIRSLEYLLLHSNQ LREQGIHPLAFQGLKRLHTVHLYNNALERVPSGLPRRVRTLMILHNQITGIGREDFAT TYFLEELNLSYNRITSPQVHRDAFRKLRLLRSLDLSGNRLHTLPPGLPRNVHVLKVKR NELAALARGALAGMAQLRELYLTSNRLRSRALGPRAWVDLAHLQLLDIAGNQLTEIPE GLPESLEYLYLQNNKISAVPANAFDSTPNLKGIFLRFNKLAVGSVVDSAFRRLKHLQV LDIEGNLEFGDISKDRGRLGKEKEEEEEEEEEEEETR" BASE COUNT 657 a 988 c 834 g 541 t ORIGIN 1 tggacttgaa tggaaggagc ccgagcccgc ggagcgcagc tgagactggg ggagcgcgtt 61 cggcctgtgg ggcgccgctc ggcgccgggg cgcagcaggt tccatcagcc ctggcgccca 121 ggcgcatctg actcggcacc ccctgcaggc accatggccc agagccgggt gctgctgctc 181 ctgctgctgc tgccgccaca gctgcacctg ggacctgtgc ttgccgtgag ggccccagga 241 tttggccgaa gtggcggcca cagcctgagc cccgaagaga acgaatttgc ggaggaggag 301 ccggtgctgg tactgagccc tgaggagccc gggcctggcc cagccgcggt cagctgcccc 361 cgagactgtg cctgttccca ggagggcgtc gtggactgtg gcggtattga cctgcgtgag 421 ttcccggggg acctgcctga gcacaccaac cacctatctc tgcagaacaa ccagctggaa 481 aagatctacc ctgaggagct ctcccggctg caccggctgg agacactgaa cctgcaaaac 541 aaccgcctga cttcccgagg gctcccagag aaggcgtttg agcatctgac caacctcaat 601 tacctgtact tggccaataa caagctgacc ttggcacccc gcttcctgcc aaacgccctg 661 atcagtgtgg actttgctgc caactatctc accaagatct atgggctcac ctttggccag 721 aagccaaact tgaggtctgt gtacctgcac aacaacaagc tggcagacgc cgggctgccg 781 gacaacatgt tcaacggctc cagcaacgtc gaggtcctca tcctgtccag caacttcctg 841 cgccacgtgc ccaagcacct gccgcctgcc ctgtacaagc tgcacctcaa gaacaacaag 901 ctggagaaga tccccccggg ggccttcagc gagctgagca gcctgcgcga gctatacctg 961 cagaacaact acctgactga cgagggcctg gacaacgaga ccttctggaa gctctccagc 1021 ctggagtacc tggatctgtc cagcaacaac ctgtctcggg tcccagctgg gctgccgcgc 1081 agcctggtgc tgctgcactt ggagaagaac gccatccgga gcgtggacgc gaatgtgctg 1141 acccccatcc gcagcctgga gtacctgctg ctgcacagca accagctgcg ggagcagggc 1201 atccacccac tggccttcca gggcctcaag cggttgcaca cggtgcacct gtacaacaac 1261 gcgctggagc gcgtgcccag tggcctgcct cgccgcgtgc gcaccctcat gatcctgcac 1321 aaccagatca caggcattgg ccgcgaagac tttgccacca cctacttcct ggaggagctc 1381 aacctcagct acaaccgcat caccagccca caggtgcacc gcgacgcctt ccgcaagctg 1441 cgcctgctgc gctcgctgga cctgtcgggc aaccggctgc acacgctgcc acctgggctg 1501 cctcgaaatg tccatgtgct gaaggtcaag cgcaatgagc tggctgcctt ggcacgaggg 1561 gcgctggcgg gcatggctca gctgcgtgag ctgtacctca ccagcaaccg actgcgcagc 1621 cgagccctgg gcccccgtgc ctgggtggac ctcgcccatc tgcagctgct ggacatcgcc 1681 gggaatcagc tcacagagat ccccgagggg ctccccgagt cacttgagta cctgtacctg 1741 cagaacaaca agattagtgc ggtgcccgcc aatgccttcg actccacgcc caacctcaag 1801 gggatctttc tcaggtttaa caagctggct gtgggctccg tggtggacag tgccttccgg 1861 aggctgaagc acctgcaggt cttggacatt gaaggcaact tagagtttgg tgacatttcc 1921 aaggaccgtg gccgcttggg gaaggaaaag gaggaggagg aagaggagga ggaggaggaa 1981 gaggaaacaa gatagtgaca aggtgatgca gatgtgacct aggatgatgg accgccggac 2041 tcttttctgc agcacacgcc tgtgtgctgt gagcccccca ctctgccgtg ctcacacaga 2101 cacacccagc tgcacacatg aggcatccca catgacacgg gctgacacag tctcatatcc 2161 ccaccccttc ccacggcgtg tcccacggcc agacacatgc acacacatca caccctcaaa 2221 cacccagctc agccacacac aactaccctc caaaccacca cagtctctgt cacaccccca 2281 ctaccgctgc cacgccctct gaatcatgca gggaagggtc tgcccctgcc ctggcacgca 2341 caggcaccca ttccctcccc ctgctgacat gtgtatgcgt atgcatacac accacacaca 2401 cacacatgca caagtcatgt gcgaacagcc ctccaaagcc tatgccacag acagctcttg 2461 ccccagccag aatcagccat agcagctcgc cgtctgccct gtccatctgt ccgtccgttc 2521 cctggagaag acacaagggt atccatgctc tgtggccagg tgcctgccac cctctggaac 2581 tcacaaaagc tggcttttat tcctttccca tcctatgggg acaggagcct tcaggactgc 2641 tggcctggcc tggcccaccc tgctcctcca ggtgctgggc agtcactctg ctaagagtcc 2701 ctccctgcca cgccctggca ggacacaggc acttttccaa tgggcaagcc cagtggaggc 2761 aggatgggag agccccctgg gtgctgctgg ggccttgggg caggagtgaa gcagaggtga 2821 tggggctggg ctgagccagg gaggaaggac ccagctgcac ctaggagaca cctttgttct 2881 tcaggcctgt gggggaagtt ccgggtgcct ttatttttta ttcttttcta aggaaaaaaa 2941 tgataaaaat ctcaaagctg atttttcttg ttatagaaaa actaatataa aagcattatc 3001 cccaaaaaaa aaaaaaaaaa //