LOCUS BC030606 1839 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens coiled-coil domain containing 11, mRNA (cDNA clone
MGC:26909 IMAGE:4831081), complete cds.
ACCESSION BC030606
VERSION BC030606.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1839)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1839)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC030606.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: j Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222173.
FEATURES Location/Qualifiers
source 1..1839
/db_xref="H-InvDB:HIT000041068"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26909 IMAGE:4831081"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1839
/gene="CCDC11"
/db_xref="GeneID:220136"
/db_xref="HGNC:HGNC:26530"
CDS 92..1636
/gene="CCDC11"
/codon_start=1
/product="coiled-coil domain containing 11"
/protein_id="AAH30606.2"
/db_xref="GeneID:220136"
/db_xref="HGNC:HGNC:26530"
/translation="MYSQRFGTVQREVKGPTPKVVIVRSKPPKGQGAEHHLERIRRSH
QKHNAILASIKSSERDRLKAEWDQHNDCKILDSLVRARIKDAVQGFIINIEERRNKLR
ELLALEENEYFTEMQLKKETIEEKKDRMREKTKLLKEKNEKERQDFVAEKLDQQFRER
CEELRVELLSIHQKKVCEERKAQIAFNEELSRQKLVEEQMFSKLWEEDRLAKEKREAQ
EARRQKELMENTRLGLNAQITSIKAQRQATQLLKEEEARLVESNNAQIKHENEQDMLK
KQKAKQETRTILQKALQERIEHIQQEYRDEQDLNMKLVQRALQDLQEEADKKKQKRED
MIREQKIYHKYLAQRREEEKAQEKEFDRILEEDKAKKLAEKDKELRLEKEARRQLVDE
VMCTRKLQVQEKLQREAKEQEERAMEQKHINESLKELNCEEKENFARRQRLAQEYRKQ
LQMQIAYQQQSQEAEKEEKRREFEAGVAANKMCLDKVQEVLSTHQVLPQNIHPMRKAC
PSKLPP"
BASE COUNT 661 a 343 c 480 g 355 t
ORIGIN
1 agacttctgc gtcgcggaag cgggtcccgc aggtcgccac ggttggggga aacgcggcgg
61 acgccgcccc cgtcccgaag gggactcgaa aatgtacagc cagcggtttg gcaccgtaca
121 gcgggaggtt aagggcccca cccccaaagt ggtgatcgtg agatccaagc ctcctaaagg
181 ccaaggagct gagcaccatc tagaaagaat ccgacgcagc catcagaagc ataatgctat
241 tttggcttcc attaagtcaa gtgagcggga tcgcttgaaa gctgagtggg accagcacaa
301 tgactgcaag attttggaca gccttgtgcg agcaagaatc aaggatgctg tgcaagggtt
361 tatcattaac attgaagaaa gacgaaataa gctacgtgag cttttagcat tagaagaaaa
421 tgagtatttt acagaaatgc aattgaagaa agaaaccatt gaggagaaaa aagataggat
481 gagagagaaa actaaattac taaaagagaa gaatgaaaaa gagaggcagg attttgtggc
541 tgaaaagcta gaccagcaat tcagggaacg ctgtgaggag ctccgtgttg aattgttatc
601 tatccatcag aagaaggtgt gtgaggagcg gaaagcacag attgcattta atgaggagct
661 gagcaggcaa aagctggtgg aagagcagat gttctccaaa ctctgggagg aagaccgatt
721 agccaaggaa aagcgagaag cccaagaggc gaggagacag aaagagctga tggagaacac
781 acgcctgggg ctgaatgccc agatcaccag catcaaggca caaaggcagg cgacacagct
841 gctgaaggaa gaggaggcac gccttgtgga aagtaacaac gcacagatta aacatgagaa
901 tgaacaggat atgctaaaga aacagaaggc aaagcaggaa actaggacca ttttgcaaaa
961 agccctacaa gagaggatag aacatattca gcaggaatac agagacgaac aggacttgaa
1021 catgaagctc gtgcaaaggg cccttcaaga cttacaggaa gaggcagata aaaagaaaca
1081 aaaaagagaa gatatgataa gagaacagaa gatataccat aaatatttgg cacagagacg
1141 tgaggaagaa aaagctcagg agaaagaatt tgacagaata ttagaggaag acaaggcaaa
1201 gaagttggct gagaaggaca aggagctgag acttgaaaag gaggcaagga gacagcttgt
1261 ggatgaggtc atgtgtacaa gaaaacttca agttcaagaa aagttgcaac gagaagctaa
1321 agaacaggaa gaacgtgcta tggaacagaa acacataaat gaaagtctta aagaacttaa
1381 ctgtgaagag aaggagaatt ttgcaagacg ccaacgttta gcccaggagt acaggaagca
1441 acttcagatg caaatcgcct accagcagca gtcccaagaa gcagagaagg aagagaaacg
1501 ccgagagttt gaagcaggtg tagcagcaaa caagatgtgt ttggacaagg tccaggaggt
1561 cctgtccacc catcaagtgc tgcctcaaaa cattcatccc atgcgcaagg catgccccag
1621 taagcttcca ccgtagttcc gtgagcatca atatatcttt tcttggtctt ttaatatttt
1681 taactacagt atgcttgtat gcttctttta actcctggat aaacttttct tttttccctg
1741 agtttgtgta attaattgaa cataattttc ttcctttgaa taaacctgtg cctattttgg
1801 agttcacaga cttacaaatc caaaaaaaaa aaaaaaaca
//