LOCUS BC030590 2985 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens retinoblastoma binding protein 8, mRNA (cDNA clone
MGC:26464 IMAGE:4830693), complete cds.
ACCESSION BC030590
VERSION BC030590.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2985)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2985)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: i Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42718012.
FEATURES Location/Qualifiers
source 1..2985
/db_xref="H-InvDB:HIT000041058"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26464 IMAGE:4830693"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2985
/gene="RBBP8"
/gene_synonym="CTIP"
/gene_synonym="RIM"
/db_xref="GeneID:5932"
/db_xref="MIM:604124"
CDS 130..2838
/gene="RBBP8"
/gene_synonym="CTIP"
/gene_synonym="RIM"
/codon_start=1
/product="RBBP8 protein"
/protein_id="AAH30590.1"
/db_xref="GeneID:5932"
/db_xref="MIM:604124"
/translation="MNISGSSCGSPNSADTSSDFKDLWTKLKECHDREVQGLQVKVTK
LKQERILDAQRLEEFFTKNQQLREQQKVLHETIKVLEDRLRAGLCDRCAVTEEHMRKK
QQEFENIRQQNLKLITELMNERNTLQEENKKLSEQLQQKIENDQQHQAAELECEEDVI
PDSPITAFSFSGVNRLRRKENPHVRYIEQTHTKLEHSVCANEMRKVSKSSTHPQHNPN
ENEILVADTYDQSQSPMAKAHGTSSYTPDKSSFNLATVVAETLGLGVQEESETQGPMS
PLGDELYHCLEGNHKKQPFEESTRNTEDSLRFSDSTSKTPPQEELPTRVSSPVFGATS
SIKSGLDLNTSLSPSLLQPGKKKHLKTLPFSNTCISRLEKTRSKSEDSALFTHHSLGS
EVNKIIIQSSNKQILINKNISESLGEQNRTEYGKDSNTDKHLEPLKSLGGRTSKRKKT
EEESEHEVSCPQASFDKENAFPFPMDNQFSMNGDCVMYKPLDLSDRFSAIQRQEKSQG
SETSKNKFRQVTLYEALKTIPKGFSSSRKASDGNCTLPKDSPGEPCSQECIILQPLNK
CSPDNKPSLQIKEENAVFKIPLRPRESLETENVLDDIKSAGSHEPIKIQTRSDHGGCE
LASVLQLNPCRTGKIKSLQNNQDVSFENIQWSIDPGADLSQYKMDVTVIDTKDGSQSK
LGGETVDMDCTLVSETVLLKMKKQEQKGEKSSMLFYIDEERKMNDSLEDMFDRTTHEE
YESCLADSFSQAADEEEELSTATKKLHTHGDKQDKVKQKAFVEPYFKGDERETSLQNF
PHIEVVRKKEERRKLLGHTCKECEIYYADMPAEEREKKLASCSRHRFRYIPPNTPENF
WEVGFPSTQTCMERGYIKEDLDPCPRPKRRQPYNAIFSPKGKEQKT"
BASE COUNT 1084 a 546 c 607 g 748 t
ORIGIN
1 agcggtttga gaacatgcgg gctacagaga ggtatttgac ctgtccaaag acgacttgat
61 acctctataa tgtaacagaa aaggtcagaa aatattaagc aagtagaagt gtggagcata
121 ttaagcaaga tgaacatctc gggaagcagc tgtggaagcc ctaactctgc agatacatct
181 agtgacttta aggacctttg gacaaaacta aaagaatgtc atgatagaga agtacaaggt
241 ttacaagtaa aagtaaccaa gctaaaacag gaacgaatct tagatgcaca aagactagaa
301 gaattcttca ccaaaaatca acagctgagg gaacagcaga aagtccttca tgaaaccatt
361 aaagttttag aagatcggtt aagagcaggc ttatgtgatc gctgtgcagt aactgaagaa
421 catatgcgga aaaaacagca agagtttgaa aatatccggc agcagaatct taaacttatt
481 acagaactta tgaatgaaag gaatactcta caggaagaaa ataaaaagct ttctgaacaa
541 ctccagcaga aaattgagaa tgatcaacag catcaagcag ctgagcttga atgtgaggaa
601 gacgttattc cagattcacc gataacagcc ttctcatttt ctggcgttaa ccggctacga
661 agaaaggaga acccccatgt ccgatacata gaacaaacac atactaaatt ggagcactct
721 gtgtgtgcaa atgaaatgag aaaagtttcc aagtcttcaa ctcatccaca acataatcct
781 aatgaaaatg aaattctagt agctgacact tatgaccaaa gtcaatctcc aatggccaaa
841 gcacatggaa caagcagcta tacccctgat aagtcatctt ttaatttagc tacagttgtt
901 gctgaaacac ttggacttgg tgttcaagaa gaatctgaaa ctcaaggtcc catgagcccc
961 cttggtgatg agctctacca ctgtctggaa ggaaatcaca agaaacagcc ttttgaggaa
1021 tctacaagaa atactgaaga tagtttaaga ttttcagatt ctacttcaaa gactcctcct
1081 caagaagaat tacctactcg agtgtcatct cctgtatttg gagctacctc tagtatcaaa
1141 agtggtttag atttgaatac aagtttgtcc ccttctcttt tacagcctgg gaaaaaaaaa
1201 catctgaaaa cactcccttt tagcaacact tgtatatcta gattagaaaa aactagatca
1261 aaatctgaag atagtgccct tttcacacat cacagtcttg ggtctgaagt gaacaagatc
1321 attatccagt catctaataa acagatactt ataaataaaa atataagtga atccctaggt
1381 gaacagaata ggactgagta cggtaaagat tctaacactg ataaacattt ggagcccctg
1441 aaatcattgg gaggccgaac atccaaaagg aagaaaactg aggaagaaag tgaacatgaa
1501 gtaagctgcc cccaagcttc ttttgataaa gaaaatgctt tcccttttcc aatggataat
1561 cagttttcca tgaatggaga ctgtgtgatg tataaacctc tggatctgtc tgatcgattt
1621 tcagctattc agcgtcaaga gaaaagccaa ggaagtgaga cttctaaaaa caaatttagg
1681 caagtgactc tttatgaggc tttgaagacc attccaaagg gcttttcctc aagccgtaag
1741 gcctcagatg gcaactgcac gttgcccaaa gattccccag gggagccctg ttcacaggaa
1801 tgcatcatcc ttcagccctt gaataaatgc tctccagaca ataaaccatc attacaaata
1861 aaagaagaaa atgctgtctt taaaattcct ctacgtccac gtgaaagttt ggagactgag
1921 aatgttttag atgacataaa gagtgctggt tctcatgagc caataaaaat acaaaccagg
1981 tcagaccatg gaggatgtga acttgcatca gttcttcagt taaatccatg tagaactggt
2041 aaaataaagt ctctacaaaa caaccaagat gtatcctttg aaaatatcca gtggagtata
2101 gatccgggag cagacctttc tcagtataaa atggatgtta ctgtaataga tacaaaggat
2161 ggcagtcagt caaaattagg aggagagaca gtggacatgg actgtacatt ggttagtgaa
2221 accgttctct taaaaatgaa gaaacaagag cagaagggag aaaaaagttc aatgctcttt
2281 tacatagatg aagaaagaaa aatgaatgat agcttggaag atatgtttga tcggacaaca
2341 catgaagagt atgaatcctg tttggcagac agtttctccc aagcagcaga tgaagaggag
2401 gaattgtcta ctgccacaaa gaaactacac actcatggtg ataaacaaga caaagtcaag
2461 cagaaagcgt ttgtggagcc gtattttaaa ggtgatgaaa gagagactag cttgcaaaat
2521 tttcctcata ttgaggtggt tcggaaaaaa gaggagagaa gaaaactgct tgggcacacg
2581 tgtaaggaat gtgaaattta ttatgcagat atgccagcag aagaaagaga aaagaaattg
2641 gcttcctgct caagacaccg attccgctac attccaccca acacaccaga gaatttttgg
2701 gaagttggtt ttccttccac tcagacttgt atggaaagag gttatattaa ggaagatctt
2761 gatccttgtc ctcgtccaaa aagacgtcag ccttacaacg caatattttc tccaaaaggc
2821 aaggagcaga agacatagac gttgaaacag aaacagaagg atgaaggaca gttttttcct
2881 tcttagttat ttatagttaa agttggtact aaacattgat ttttttgatc ttctgtaaat
2941 ggatttataa atcagttttc tattgaaaga aaaaaaaaaa aaaaa
//