LOCUS BC030579 2449 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 2, mRNA (cDNA clone
MGC:26071 IMAGE:4828158), complete cds.
ACCESSION BC030579
VERSION BC030579.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2449)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2449)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC030579.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: d Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15451863.
FEATURES Location/Qualifiers
source 1..2449
/db_xref="H-InvDB:HIT000041050"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26071 IMAGE:4828158"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2449
/gene="B3GNT2"
/gene_synonym="B3GN-T1"
/gene_synonym="B3GN-T2"
/gene_synonym="B3GNT"
/gene_synonym="B3GNT-2"
/gene_synonym="BETA3GNT"
/db_xref="GeneID:10678"
/db_xref="HGNC:HGNC:15629"
/db_xref="MIM:605581"
CDS 108..1301
/gene="B3GNT2"
/gene_synonym="B3GN-T1"
/gene_synonym="B3GN-T2"
/gene_synonym="B3GNT"
/gene_synonym="B3GNT-2"
/gene_synonym="BETA3GNT"
/codon_start=1
/product="B3GNT2 protein"
/protein_id="AAH30579.1"
/db_xref="GeneID:10678"
/db_xref="HGNC:HGNC:15629"
/db_xref="MIM:605581"
/translation="MSVGRRRIKLLGILMMANVFIYFIMEVSKSSSQEKNGKGEVIIP
KEKFWKISTPPEAYWNREQEKLNRQYNPILSMLTNQTGEAGRLSNISHLNYCEPDLRV
TSVVTGFNNLPDRFKDFLLYLRCRNYSLLIDQPDKCAKKPFLLLAIKSLTPHFARRQA
IRESWGQESNAGNQTVVRVFLLGQTPPEDNHPDLSDMLKFESEKHQDILMWNYRDTFF
NLSLKEVLFLRWVSTSCPDTEFVFKGDDDVFVNTHHILNYLNSLSKTKAKDLFIGDVI
HNAGPHRDKKLKYYIPEVVYSGLYPPYAGGGGFLYSGHLALRLYHITDQVHLYPIDDV
YTGMCLQKLGLVPEKHKGFRTFDIEEKNKNNICSYVDLMLVHSRKPQEMIDIWSQLQS
AHLKC"
BASE COUNT 724 a 443 c 521 g 761 t
ORIGIN
1 agggccattt agctgcaaac tgtctctgtc tctgtttatc cgagcagaac ctggaagggg
61 ctggcaagga ctaggcaaca gatgggacag ccagagagat atgagaaatg agtgttggac
121 gtcgaagaat aaagttgttg ggtatcctga tgatggcaaa tgtcttcatt tattttatta
181 tggaagtctc caaaagcagt agccaagaaa aaaatggaaa aggggaagta ataataccca
241 aagagaagtt ctggaagata tctacccctc ccgaggcata ctggaaccga gagcaagaga
301 agctgaaccg gcagtacaac cccatcctga gcatgctgac caaccagacg ggggaggcgg
361 gcaggctctc caatataagc catctgaact actgcgaacc tgacctgagg gtcacgtcgg
421 tggttacggg ttttaacaac ttgccggaca gatttaaaga ctttctgctg tatttgagat
481 gccgcaatta ttcactgctt atagatcagc cggataagtg tgcaaagaaa cctttcttgt
541 tgctggcgat taagtccctc actccacatt ttgccagaag gcaagcaatc cgggaatcct
601 ggggccaaga aagcaacgca gggaaccaaa cggtggtgcg agtcttcctg ctgggccaga
661 cacccccaga ggacaaccac cccgaccttt cagatatgct gaaatttgag agtgagaagc
721 accaagacat tcttatgtgg aactacagag acactttctt caacttgtct ctgaaggaag
781 tgctgtttct caggtgggta agtacttcct gcccagacac tgagtttgtt ttcaagggcg
841 atgacgatgt ttttgtgaac acccatcaca tcctgaatta cttgaatagt ttatccaaga
901 ccaaagccaa agatctcttc ataggtgatg tgatccacaa tgctggacct catcgggata
961 agaagctgaa gtactacatc ccagaagttg tttactctgg cctctaccca ccctatgcag
1021 ggggaggggg gttcctctac tccggccacc tggccctgag gctgtaccat atcactgacc
1081 aggtccatct ctaccccatt gatgacgttt atactggaat gtgccttcag aaactcggcc
1141 tcgttccaga gaaacacaaa ggcttcagga catttgatat cgaggagaaa aacaaaaata
1201 acatctgctc ctatgtagat ctgatgttag tacatagtag aaaacctcaa gagatgattg
1261 atatttggtc tcagttgcag agtgctcatt taaaatgcta aaatagatac aaactcaatt
1321 ttgcatagaa aggtgtattt tgaatagttc ccatgttgtg ttctcacatt agagtaattt
1381 ctgtattaaa ccatgaaaat tgcctttatg agtgataccc atttgagggc ctctaaaccc
1441 ttcaatttgg tactcacgtg aagagggaaa gcggaagatg gtaatttttt tttacggatg
1501 atatggcagg atgattggtt ctgatcttac cggctagtgg tcatttttaa aaaacttgta
1561 ccctcttatc tgaaatcctg tttctggaat ttggccattt taagtgattt tgtttgccct
1621 cttctataat attcctactt cccataataa tgactgattt atttgtaatt caggtattta
1681 taaacctatt ggctacaaag actttgttaa acattatcca gtggttttcg tgaaatggaa
1741 ttatgtttat ttttatggga tttgggtaaa ttttaaattg tctagaaaac tgaaatttca
1801 gttgtcagtt gtggaattca gtttttcaat tgtggaaatt tcctgccacc ccaacagtat
1861 ttttgtgtgt taattaattt tgcaaaatga gaatcatggt gtgacactca tctaatttat
1921 cttgttgtga tgttatggtc ataataagga gaaagagggt ttaatttttc ttgtatttgg
1981 tttcctggtg gtatcatagt gtaattttag tatttgaaaa tcagtgtgat tccttaatgg
2041 ccaactgaag attgaattgc cgctaacaac catatcgtgt tagtgaattt tcaatatgga
2101 ccaggaaggc atatgtattt tgaacttgag tgaaaaggtt gaagttacag acttttgcat
2161 agatggtttg tcagtttaaa attccagaat ttattattgc catattttca catgctgctt
2221 atacaagatt attattgagt agtaactgct tccctgtcta tgtagaagtg cctgtgtttt
2281 tatttattgt tcagatcaaa gaccaaaaca ttttcttaaa tatattttat gtaatatttt
2341 atttgtatac agtgttgttg atgaaatatt taactagagc atgatatttt aaatgttaag
2401 gtgtaacata tgttaaataa aactgttatt tttgaaaaaa aaaaaaaaa
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