LOCUS BC030558 2781 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 9 open reading frame 7, mRNA (cDNA clone
MGC:40292 IMAGE:5223979), complete cds.
ACCESSION BC030558
VERSION BC030558.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2781)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2781)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: o Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8922115.
FEATURES Location/Qualifiers
source 1..2781
/db_xref="H-InvDB:HIT000041045"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40292 IMAGE:5223979"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2781
/gene="C9orf7"
/gene_synonym="D9S2135"
/db_xref="GeneID:11094"
/db_xref="HGNC:HGNC:1365"
CDS 69..587
/gene="C9orf7"
/gene_synonym="D9S2135"
/codon_start=1
/product="chromosome 9 open reading frame 7"
/protein_id="AAH30558.1"
/db_xref="GeneID:11094"
/db_xref="HGNC:HGNC:1365"
/translation="MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAI
SGLFNCITIHPLNIAAGVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKA
VFYCGMAVVPIVISLTLTTLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQAD
EEKLAETLEGEL"
BASE COUNT 492 a 837 c 892 g 560 t
ORIGIN
1 gccggctcgg acgcggccgg ctaccgagcc ctttgtgagg gctgtgagct gcgcctgacg
61 gtggcaccat gagcagctca ggtggggcgc ccggggcgtc cgccagctct gcgccgcccg
121 cgcaggaaga gggcatgacg tggtggtacc gctggctgtg tcgcctgtct ggggtgctgg
181 gggcagtctc ttgcgcgatc tctggcctct tcaactgcat caccatccac cctctgaaca
241 tcgcggccgg cgtgtggatg atcatgaatg ccttcatctt gttgctgtgt gaggcgccct
301 tctgctgcca gttcatcgag tttgcaaaca cagtggcgga gaaggtggac cggctgcgct
361 cctggcagaa ggctgtcttc tactgcggga tggcggtcgt tcccatcgtc atcagcctga
421 ccctgaccac gctgctgggc aacgccatcg cctttgctac gggggtgctg tacggactct
481 ctgctctggg caaaaagggc gatgcgatct cctatgccag gatccagcag cagaggcagc
541 aggcggatga ggagaagctc gcggagaccc tggaggggga gctgtgaagg gctgggcgcc
601 cctccctccc tgtcccctct tctggctctg tgtgggtcca agtgaggcct ggactgtcca
661 cgctgaggca cagcctggag aggggccttt gcacgtgtcc ctacacctgg agtcctctgc
721 tcctttctcc agactggctt aagccaggag ccactggctg ctggtgtgag ggtctgggct
781 gctggacttg aggcagagcc tgcagcagct gtgtggacac tacccagccc tactcctctg
841 ctgggtgggt ctgcagatct cacaccacag acagggctgc ctgtgacctg ctgtgacctg
901 ggagcagctt cccctggaga tgctggtcct ggcttgaggg gaggggcaag tgggaccctg
961 ccacctgggc actgagcaga gggacctccc ccagctctct tagcaggtgg agccccaggg
1021 cctgggacag cctgccgctg ccagcaacct cccactgctg cctagggtgc agcgcccact
1081 gtcaccctgc cttctgaaga agcccacagg gctcctaagg tgcaccccgg tacctggaac
1141 tgcagccttg gcagtgactg gacagctggg tgggggatgc tccctgctgg ccctgggaac
1201 cttggacagg ccacctcaag gcccctcggc tgcccctcct ccctgggcct gctggggccc
1261 ctaggttctg cccatcaccc cccgcccctg ctggccttgg tgctaaggaa gtggggagag
1321 caggctctcc ctggcaccga gggtgcccac cctctccctg gtgtggcccc gtcaacatca
1381 gccacagccc agccccatta gtgggttagt gggtctgacc tcagccccac tcaggtgctc
1441 ctgctggcct gcccaagccc tgccctcagg gagcttctgc cttttaagaa ctgggcagag
1501 gccacagtca cctccccaca cagagctgtc cccactgccc tgggtgccag gctgtccgga
1561 gccaggccta cccagggagg atgcagagag ctggtgccca ggatgtgcac ccccatattc
1621 cctctgccct gtggcctcag cccgctggcc tctctgaccg tgaggctggc tctcagccat
1681 cgggcaggtg cctggtcggg cctggcttag cccaggtggg gcttggcaga agcgggcggg
1741 tgtggaagat attccatctg gggccaaccc caggctgggc ctgcgctgag cttctggagc
1801 gcaggtactg ggtcttgcta agtgaactgt ttcccaggaa cacctctcgg gcccatctgc
1861 gtctgaggct gggagtggca tctgaggccg ggagtggcat ctgaggccag gagtggcagg
1921 ctggtgggct gggcgtgggg ttttctgggc cctgcccagt actgccctgg ggacttggtg
1981 ggctcctggg tcagcagcat cccacccctg ggagtctggc cagctgagcc ccagggtggc
2041 aggggcatta tagcctggtg gacatgtgcc ttcagggttc ctccggggcc accttcctca
2101 ggccagtgct gggttcaaag ggctgtgtgt gtgtgtgtgt gtgtgtgtgt gtatgtatat
2161 gtgtgtgggt gcacacatct gtcccatgta tgcagtgaga cctgtctacc tcccacaagg
2221 agcaagggct ctgcccgccc tctgctcatt cctacccagg tagtgggacc ccgggccccc
2281 ttctgcctgg cttgcctgct tctgcccttt ccagaggggt ctcactgaca gccagagaca
2341 gcaggagaag ggttggctgt ggatcaagga aggctgcccc tgtaccctgt ggggaaatgg
2401 tgggtgcatg gctggatgca gaggtggaag gccctgggcc acaggcgaga gtgggcgtgt
2461 cacctgtccc aggttcccag caagtctgca gctgtgcagt cctggggtcc ctgaccctgt
2521 cgcccagggg gcgtgctgtc cagcaggggc cctgccttgc aaggaacgtc tcttccggcg
2581 gctgggccgc tcctgcctgg tctgggctgt gtgtggcgcc ctttcctcct tgtttgttcc
2641 tctgtgttct gtgtgcgtct taagcaataa agcgtggccg tggaaaaaaa aaaaaaaaaa
2701 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2761 aaaaaaaaaa aaaaaaaaaa a
//