LOCUS BC030524 1616 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens claudin 19, mRNA (cDNA clone MGC:40523 IMAGE:5207628),
complete cds.
ACCESSION BC030524
VERSION BC030524.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1616)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1616)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: i Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22507371.
FEATURES Location/Qualifiers
source 1..1616
/db_xref="H-InvDB:HIT000041027"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40523 IMAGE:5207628"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1616
/gene="CLDN19"
/db_xref="GeneID:149461"
CDS 78..713
/gene="CLDN19"
/codon_start=1
/product="CLDN19 protein"
/protein_id="AAH30524.1"
/db_xref="GeneID:149461"
/translation="MANSGLQLLGYFLALGGWVGIIASTALPQWKQSSYAGDAIITAV
GLYEGLWMSCASQSTGQVQCKLYDSLLALDGHIQSARALMVVAVLLGFVAMVLSVVGM
KCTRVGDSNPIAKGRVAIAGGALFILAGLCTLTAVSWYATLVTQEFFNPSTPVNARYE
FGPALFVGWASAGLAVLGGSFLCCTCPEPERPNSSPQPYRPGPSAAAREYV"
misc_feature 87..623
/gene="CLDN19"
/note="PMP22_Claudin; Region: PMP-22/EMP/MP20/Claudin
family"
/db_xref="CDD:pfam00822"
BASE COUNT 317 a 543 c 449 g 307 t
ORIGIN
1 ctggccatga ccaaagcccc tgctggcacc ctggcccagc tctgagtcct gggaccctcg
61 gtcctctctc ctgggccatg gccaactcag gcctccagct cctgggctac ttcttggccc
121 tgggtggctg ggtgggcatc attgctagca cagccctgcc acagtggaag cagtcttcct
181 acgcaggcga cgccatcatc actgccgtgg gcctctatga agggctctgg atgtcctgcg
241 cctcccagag cactgggcaa gtgcagtgca agctctacga ctcgctgctc gccctggacg
301 gtcacatcca atcagcgcgg gccctgatgg tggtggccgt gctcctgggc ttcgtggcca
361 tggtcctcag cgtagttggc atgaagtgta cgcgggtggg agacagcaac cccattgcca
421 agggccgtgt tgccatcgcc gggggagccc tcttcatcct ggcaggcctc tgcactttga
481 ctgctgtctc gtggtatgcc accctggtga cccaggagtt cttcaaccca agcacacctg
541 tcaatgccag gtatgaattt ggcccagccc tgttcgtggg ctgggcctca gctggcctgg
601 ccgtgctggg cggctccttc ctctgctgca catgcccgga gccagagaga cccaacagca
661 gcccacagcc ctatcggcct ggaccctctg ctgctgcccg agagtacgtc tgagctctgc
721 ctgccctggc cagcccccca cccagtggcc cccttgccca gcatccagcc agcctcgcag
781 caccctgggc agggccactg gggcatagga tgggcatagg tgctctgagc agcttgtcct
841 caacacaagc acccaccctg caatctgaga cccagatcct cagagagaca ccagaggcag
901 gacccagccc ccaggcatac acacagatgc aggtccaggc acggtcttgt ctgcacagcc
961 tggtgggcac cagcatgcat ccctggagac aggccctcag gcaccagccc ggctgtttac
1021 tcactgaaga gctgcgtggg tgtctgctac gtgctgggcc ctagagatag agcagtggcc
1081 aagacgtacc ttagtaccca ggtccttggg gtgagcagaa accttcaccc tccccagtcc
1141 catgggctcc tcacagcaac cccacaaggg cagtgccggg atgctgaacg ttcacacaag
1201 gacagggagg gtctgagttt aggtctcagg ttcttccagt gcgcccaggg ctgggggcca
1261 cctacacaga tggtgaggtc ggaccatggc gcccctgccc ccgggaatgg gccccaggca
1321 gggctgctgt gagggccaag gtctggccac gctggccagt acccatgtcc gggcctgaat
1381 gcacagcccc tgcccccgac cccacagctc actccactaa ccagctctct ctcttttgac
1441 tttcagacca gttgttaaat tgcccgcctc cgccaagggc cccctgggtg tgtaatgtcc
1501 agtccccagc caggctctgt cccctgccat acctagactg tgtgtttcat atttttttgg
1561 aaagagaagt gaacatccag ccccaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//