LOCUS BC030512 1657 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class
U, mRNA (cDNA clone MGC:40420 IMAGE:4942673), complete cds.
ACCESSION BC030512
VERSION BC030512.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1657)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1657)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: c Column: 9.
FEATURES Location/Qualifiers
source 1..1657
/db_xref="H-InvDB:HIT000041021"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40420 IMAGE:4942673"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1657
/gene="PIGU"
/gene_synonym="GAB1"
/gene_synonym="MGC40420"
/db_xref="GeneID:128869"
/db_xref="HGNC:HGNC:15791"
/db_xref="MIM:608528"
CDS 12..1319
/gene="PIGU"
/gene_synonym="GAB1"
/gene_synonym="MGC40420"
/codon_start=1
/product="phosphatidylinositol glycan anchor biosynthesis,
class U"
/protein_id="AAH30512.1"
/db_xref="GeneID:128869"
/db_xref="HGNC:HGNC:15791"
/db_xref="MIM:608528"
/translation="MAAPLVLVLVVAVTVRAALFRSSLAEFISERVEVVSPLSSWKRV
VEGLSLLDLGVSPYSGAVFHETPLIIYLFHFLIDYAELVFMITDALTAIALYFAIQDF
NKVVFKKQKLLLELDQYAPDVAELIRTPMEMRYIPLKVALFYLLNPYTILSCVAKSTC
AINNTLIAFFILTTIKGSAFLSAIFLALATYQSLYPLTLFVPGLLYLLQRQYIPVKMK
SKAFWIFSWEYAMMYVGSLVVIICLSFFLLSSWDFIPAVYGFILSVPDLTPNIGLFWY
FFAEMFEHFSLFFVCVFQINVFFYTIPLAIKLKEHPIFFMFIQIAVIAIFKSYPTVGD
VALYMAFFPVWNHLYRFLRNIFVLTCIIIVCSLLFPVLWHLWIYAGSANSNFFYAITL
TFNVGQILLISDYFYAFLRREYYLTHGLYLTAKDGTEAMLVLK"
BASE COUNT 357 a 443 c 378 g 479 t
ORIGIN
1 ccacgcgtcc gatggcggct cccttggtcc tggtgctggt ggtggctgtg acagtgcggg
61 cggccttgtt ccgctccagt ctggccgagt tcatttccga gcgggtggag gtggtgtccc
121 cactgagctc ttggaagaga gtggttgaag gcctttcact gttggacttg ggagtatctc
181 cgtattctgg agcagtattt catgaaactc cattaataat atacctcttt catttcctaa
241 ttgactatgc tgaattggtg tttatgataa ctgatgcact cactgctatt gccctgtatt
301 ttgcaatcca ggacttcaat aaagttgtgt ttaaaaagca gaaactcctc ctagaactgg
361 accagtatgc cccagatgtg gccgaactca tccggacccc tatggaaatg cgttacatcc
421 ctttgaaagt ggccctgttc tatctcttaa atccttacac gattttgtct tgtgttgcca
481 agtctacctg tgccatcaac aacaccctca ttgctttctt cattttgact acgataaaag
541 gcagtgcttt cctcagtgct atttttcttg ccttagcgac ataccagtct ctgtacccac
601 tcaccttgtt tgtcccagga ctcctctatc tcctccagcg gcagtacata cctgtgaaaa
661 tgaagagcaa agccttctgg atcttttctt gggagtatgc catgatgtat gtgggaagcc
721 tagtggtaat catttgcctc tccttcttcc ttctcagctc ttgggatttc atccccgcag
781 tctatggctt tatactttct gttccagatc tcactccaaa cattggtctt ttctggtact
841 tctttgcaga gatgtttgag cacttcagcc tcttctttgt atgtgtgttt cagatcaacg
901 tcttcttcta caccatcccc ttagccataa agctaaagga gcaccccatc ttcttcatgt
961 ttatccagat cgctgtcatc gccatcttta agtcctaccc gacagtgggg gacgtggcgc
1021 tctacatggc cttcttcccc gtgtggaacc atctctacag attcctgaga aacatctttg
1081 tcctcacctg catcatcatc gtctgttccc tgctcttccc tgtcctgtgg cacctctgga
1141 tttatgcagg aagtgccaac tctaatttct tttatgccat cacactgacc ttcaacgttg
1201 ggcagatcct gctcatctct gattacttct atgccttcct gcggcgggag tactacctca
1261 cacatggcct ctacttgacc gccaaggatg gcacagaggc catgctcgtg ctcaagtagg
1321 cctggctggc acagggctgc atggacctca gggggctgtg gggccagaag ctgggccaag
1381 ccctccagcc agagttgcca gcaggcgagt gcttgggcag aagaggttcg agtccagggt
1441 cacaagtctc tggtaccaaa agggacccat ggctgactga cagcaaggcc tatggggaag
1501 aactgggagc tccccaactt ggacccccac cttgtggctc tgcacaccaa ggagccccct
1561 cccagacagg aaggagaaga ggcaggtgag cagggcttgt tagattgtgg ctacttaata
1621 aatgtttttt gttatgaagt ctaaaaaaaa aaaaaaa
//