LOCUS BC030252 3782 bp mRNA linear HUM 19-JUL-2018
DEFINITION Homo sapiens suppressor of defective silencing 3 homolog (S.
cerevisiae), mRNA (cDNA clone IMAGE:3879376), partial cds.
ACCESSION BC030252
VERSION BC030252.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3782)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3782)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
REFERENCE 3 (bases 1 to 3782)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JUL-2018) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Jul 19, 2018 this sequence version replaced BC030252.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: a Column: 18.
FEATURES Location/Qualifiers
source 1..3782
/db_xref="H-InvDB:HIT000092100"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3879376"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3782
/gene="SUDS3"
/gene_synonym="FLJ00052"
/gene_synonym="SAP45"
/gene_synonym="SDS3"
/db_xref="GeneID:64426"
/db_xref="HGNC:HGNC:29545"
/db_xref="MIM:608250"
CDS <1..475
/gene="SUDS3"
/gene_synonym="FLJ00052"
/gene_synonym="SAP45"
/gene_synonym="SDS3"
/codon_start=2
/product="SUDS3 protein"
/protein_id="AAH30252.2"
/db_xref="GeneID:64426"
/db_xref="HGNC:HGNC:29545"
/db_xref="MIM:608250"
/translation="GDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQ
IMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQ
AIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA"
BASE COUNT 948 a 775 c 824 g 1235 t
ORIGIN
1 tggagattct atggaggtga aacctatcat gaccagaaag ttgcggaggc gaccaaatga
61 tcccgtcccc atcccagaca agaggaggaa acctgctcca gcccagctaa actatttgtt
121 aacagatgaa cagatcatgg aggatctgag aacattaaat aagcttaagt cacccaagag
181 accagcatct ccatcctctc ctgagcactt gcctgcaaca cccgcggaat ctccagccca
241 gaggttcgaa gctcggatag aagatggcaa actgtactat gacaaaagat ggtaccacaa
301 gagccaggcc atctatctgg agtcaaagga caaccagaaa ctgagctgcg tgatcagttc
361 tgtaggagcc aatgagatct gggtgaggaa gacaagtgac agcaccaaga tgaggatcta
421 cctgggccag cttcagcgcg ggctcttcgt gatccgccgg cgctcagctg cttgactttc
481 tacagtgctc ttctcttgac cctttttctg gagtgggttt tatttttgtt ttgtttcgtt
541 ttctccttaa tagaaaaatg ttaacttact gggaatagct actcagcctt ggaaatggag
601 agcactgcag tgaattcttt agggcacttt tgtggccgga tgcttccaac tttgtcagtc
661 ttttctgcct caacttcttc cagacatcag tcaccatgag actgttttac tttcaggcgt
721 attggggggt ttgatttact ttccttttat ttctttattt tttgcttata cttgtttttg
781 aaaacctcct ctgagtttga agggacagct atttttattg attatcttta agtctctcta
841 ccatggagaa gagcaggaag ggatacactc tccagtgcat tttcatgttt tgaatctgat
901 tagtggatca cgtagctact ttccctgtcg cgtccaattc actatttgcc cagaagcttg
961 gggcagaggt cctagcagga gatgatgaat tctcgtggct ctcggccttc tcagagaaat
1021 aaatgctttg tgtaacatct gtgcacacca tccattccgc tcgctgagcg atggaaaagc
1081 ttgcctggaa gactatgtgc actgaagtaa atggggttgg gggaggggac atttcatatt
1141 tataatgtgc tgaaggtacc atattttaaa tgttatttaa tgcaggtgat ttattcaaac
1201 atttgttcta gcttaagctg gaataagcag tggtcatttc agaagttttc atttgtaatt
1261 ccttcctctc ccttgttccc aagtaggtag tagtaagtat gtgccacagg ctgattatct
1321 gggtaatctt ttacgggtgg gaggtgagat tgatagtgca ataatcagtg atctatagac
1381 cctcatgcac gattcaagtt tcactcttgt ggctgatgcc attattgcac attggccatt
1441 ccaaacctgt ggagaacttt gttgtcaggc cctgagcgct cacagcttca tttggcccag
1501 gttgaagaca aggaaagctc tgctgtggct gcctctggac tgacaccctc cctaatgagt
1561 cctgatgaaa cagcctttcc tacatccttc cctcactccc atgattggag aaatgattca
1621 ttgggtgatg agtgttgggg ttttctatac tcatgttgcc atcttgagat gttcaaaaat
1681 ttggggttag agcaactgtt agcgtctcta tgagcaatca gtagaactta cacatcctag
1741 gaaatctttc tttgtaagta attcttttgg tctcaagtga ttctcttcat gttgtctctt
1801 gatgtacata cccccaagca agttgggggg actgtgatga caattaaatc accttctctg
1861 aagttctggc tctgcagaga ccaaacctta ctgacttgta cagacttgta caagtaaaga
1921 cttatacaga tagatttttg ttttaactta caatccgttt tttcctcttt tttttttttt
1981 ttctggtgtt ggagtcttat ttagaaaaca ggataaatga cgctgttatc aaaagttgcc
2041 tggggttctg tatttcttct ctgccctcca atccccgact gctatgatgt ttactacagt
2101 gaacccagcc catggtaaac acaggcttca cctgttcttg tttgttagcc ttgactgtga
2161 ggcaggactt ccctcgcttg aactgttaca catacgatgt gtgtgtcaca tcacatattg
2221 tgcagctgtt ggttttcatg tagtgccctg cgatggaaat tagatatatt tcatgtattt
2281 ttccattgaa ggtggagttt ttcaatgatc atgtgttttg tcctcctaaa cagtatacca
2341 aagtttgttt ttatagttga ggattgtatt gataaccact ggggttccgc attgaagcag
2401 gaacaaattg cctctttttc tggccttctc tgtgggacct ctgcttttgt gaagcaacta
2461 tttatttgaa gaccagggta tgggcacttt tgccttctct cctctctgac ttttgagggt
2521 attgagggcg cccttagtca tagtctcgac tccgccattg ccttctcctc ggcgtcctca
2581 caactcttaa ttgggcctag tgaaaatggg ggcaggtgag aagtccattt tgagaatcag
2641 catagtaaat tacatttcta atcccagagg acttaatatt ttcttttgtc accccagagg
2701 tgaaaaatca gcagttgaag cctgacaggc ctcagtggtg accaggaaca gaagcagcct
2761 tcctgttagt agatgggggt acttctgtgg tgggcagaag ccttactaaa ggggaagaca
2821 gactttgaag tttctagacg agaaggaggc tagcttctag cctgggtggc cattattcca
2881 aaaggtcatt gtttctcact agaccccagg gcaccagatg aatttccaag tttaaactct
2941 ttcctgcagg tgattacttt gaaaaaggtt ggtccagacc attttgatca agaacctgta
3001 tatgtgttgt gttagaggca tctgcctcaa gtctatgtgc agtgtttgct gcgggtgtgt
3061 tccaatattc attttacctc tgcttggggg ttttgtgtgt tcccctcccc ccatgccctg
3121 cctaccccct tttccctgaa ccacgtcctt ttgaataatt tccagatgga tttctgtagc
3181 cataccaaag ccagggtgtt ttcattcatg cggatactag tatttataga tgtctgacta
3241 cctaacttaa tttttgtttt tgaacttcta attggggcca gtgtaaggtc gatcccagag
3301 gctgatctgc aaatcaagct acatgtattt gtgtataaga ccctgtgttc aggactgggt
3361 gacttttcta agaaatatgg ggtttagaat ggggttgact gtatttttta acctaattct
3421 ggagagaaga ttgtattttt tacagttttt tgggtttggc ttccttctca catttcttta
3481 gctttgaatt tttactaaat aaatttcctc ctgattaatt ttttttttct catctgggaa
3541 tttgaaatct cggtgcttac tgttacacca atttgtccaa agagttgaaa tcactttaat
3601 gccagaacat ggtaaatttg cagccatttc aagcaggtgg tggtcttttt ttataacatc
3661 gttaacgggt accattaaat attctgagag gtgaatgtaa aatataaaag gtataggttt
3721 tttttttttt tttaaagaaa acaataaact ttcaaagaga aaaccaaaaa aaaaaaaaaa
3781 aa
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