LOCUS BC030236 693 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens selenoprotein M, mRNA (cDNA clone MGC:40146 IMAGE:4184342), complete cds. ACCESSION BC030236 VERSION BC030236.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 693) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 693) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 62 Row: a Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 46370092. FEATURES Location/Qualifiers source 1..693 /db_xref="H-InvDB:HIT000092093" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:40146 IMAGE:4184342" /tissue_type="Brain, glioblastoma with EGFR amplification" /clone_lib="NCI_CGAP_Brn64" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..693 /gene="SELM" /gene_synonym="MGC40146" /gene_synonym="SEPM" /db_xref="GeneID:140606" CDS 18..455 /gene="SELM" /gene_synonym="MGC40146" /gene_synonym="SEPM" /codon_start=1 /transl_except=(pos:159..161,aa:Sec) /product="selenoprotein M" /protein_id="AAH30236.1" /db_xref="GeneID:140606" /translation="MSLLLPPLALLLLLAALVAPATAATAYRPDWNRLSGLTRARVET CGGUQLNRLKEVKAFVTQDIPFYHNLVMKHLPGADPELVLLGRRYEELERIPLSEMTR EEINALVQELGFYRKAAPDAQVPPEYVWAPAKPPEETSDHADL" BASE COUNT 164 a 222 c 194 g 113 t ORIGIN 1 ccacgcgtcc ggtcccgatg agcctcctgt tgcctccgct ggcgctgctg ctgcttctcg 61 cggcgcttgt ggccccagcc acagccgcca ctgcctaccg gccggactgg aaccgtctga 121 gcggcctaac ccgcgcccgg gtagagacct gcgggggatg acagctgaac cgcctaaagg 181 aggtgaaggc tttcgtcacg caggacattc cattctatca caacctggtg atgaaacacc 241 tccctggggc cgaccctgag ctcgtgctgc tgggccgccg ctacgaggaa ctagagcgca 301 tcccactcag tgaaatgacc cgcgaagaga tcaatgcgct agtgcaggag ctcggcttct 361 accgcaaggc ggcgcccgac gcgcaggtgc cccccgagta cgtgtgggcg cccgcgaagc 421 ccccagagga aacttcggac cacgctgacc tgtaggtccg ggggcgcggc ggagctggga 481 cctacctgcc tgagtcctgg agacagaatg aagcgctcag catcccggga atacttctct 541 tgctgagagc cgatgcccgt ccccgggcca gcagggatgg ggttggggag gttctcccaa 601 ccctttcttc cttccccagc tccactaaat tccctcctgc cttaaaaaaa aaaaaaaaaa 661 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //