LOCUS BC030162 3606 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 18, mRNA
(cDNA clone MGC:29463 IMAGE:5020970), complete cds.
ACCESSION BC030162
VERSION BC030162.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3606)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3606)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC030162.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: n Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51871334.
FEATURES Location/Qualifiers
source 1..3606
/db_xref="H-InvDB:HIT000040971"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29463 IMAGE:5020970"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3606
/gene="DNAJC18"
/gene_synonym="MGC29463"
/db_xref="GeneID:202052"
/db_xref="HGNC:HGNC:28429"
CDS 6..1082
/gene="DNAJC18"
/gene_synonym="MGC29463"
/codon_start=1
/product="DnaJ (Hsp40) homolog, subfamily C, member 18"
/protein_id="AAH30162.1"
/db_xref="GeneID:202052"
/db_xref="HGNC:HGNC:28429"
/translation="MAATLGSGERWTEAYIDAVRRNKYPEDTPPESHDPCGCCNCMKA
QKEKKSENEWTQTRQGEGNSTYSEEQLLGVQRIKKCRNYYEILGVSRDASDEELKKAY
RKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTAPRARPY
NYYRDFEADITPEELFNVFFGGHFPTGNIHMFSNVTDDTYYYRRRHRHERTQTQKEEE
EEKPQTTYSAFIQLLPVLVIVIISVITQLLATNPPYSLFYKSTLGYTISRETQNLQVP
YFVDKNFDKAYRGASLHDLEKTIEKDYIDYIQTSCWKEKQQKSELTNLAGLYRDERLK
QKAESLKLENCEKLSKLIGLRRGG"
BASE COUNT 1058 a 818 c 807 g 923 t
ORIGIN
1 ccgatatggc ggcgactctg ggcagcgggg agcgctggac ggaagcttac attgacgcag
61 ttagaagaaa caaataccca gaagacacac ctcctgagag tcatgacccc tgtggctgct
121 gtaactgcat gaaggcacaa aaggaaaaga agtctgagaa tgagtggact cagacccggc
181 agggtgaggg gaactccacg tacagtgagg aacagctgct tggggtacaa aggatcaaga
241 aatgcagaaa ttactatgaa attctgggag tttctcgaga tgctagtgac gaagagctta
301 agaaagctta cagaaaactc gccctgaaat ttcaccctga caagaactgt gctcctggag
361 caacagatgc tttcaaagca ataggaaatg catttgcagt cctgagcaat cctgataaga
421 gacttcgcta tgatgaatac ggagatgaac aggtgacttt cactgcccct cgagccagac
481 cttataatta ttacagggat tttgaagctg acatcactcc agaagagctg ttcaacgtct
541 tctttggagg acattttcct acaggaaata ttcatatgtt ttcaaatgtg acagatgaca
601 cttactatta ccgtcgacgg caccgacatg agaggacaca gactcagaag gaggaggaag
661 aagagaaacc tcagactaca tattctgcat ttattcagct acttccagtt cttgtgattg
721 tgattatatc tgtcattact cagctgctgg ctactaatcc cccatatagt ctgttctata
781 aatcgacctt gggctacacc atttctagag aaactcagaa cctgcaggtg ccttactttg
841 tggataaaaa ctttgacaag gcctacagag gagcttctct gcatgacttg gagaaaacaa
901 tagagaagga ttacattgat tatatccaga ctagttgttg gaaggagaaa caacaaaagt
961 cagagctgac aaatttggca ggattataca gagatgaacg attgaaacag aaagcagagt
1021 cgctgaaact tgaaaactgt gagaaacttt ccaaactcat tggcctacgc agaggtggct
1081 gagaggataa tggtcctacg cagggctggg gttttgctac ttgttcctat ttatgttcct
1141 gattccattt tataatacaa aactaggtaa tgatgaacac tttactattt gctaacttcg
1201 ttggttgggc agagtggcag gagcatgggc acgagagcca gatgtgtctt cacaggatcc
1261 ttcctgggga gtggctccag ggaccaggag tagttcatct aagttaaatt aatggcaagg
1321 cattggattc cgtctccctg ctccatgcct accctgccta tgtgaatgga gttcagggca
1381 tcccagagca gatccatgct ttcttccttc ttcccttctt cagtgaagtc ttaagaacca
1441 ggcattccta ggcttagcca aagcttaata ttagttattt acactgtcta ccaagaatta
1501 tacctctccc ttcattagag tcatcatctc cgccaagatt tagcctttgg aacatgttcc
1561 tgcccagctt tccattttct aggggaatat ggagaaattt aaactattgt agtcaatagt
1621 tttctattat tccaatctct gctcagttag tagcattagc aaactgccta atttgagatt
1681 cctttatttc cttaaccctc tctcctttag agagtccaga aattaaaact actgagcagc
1741 atctggaggc gggggccagg gcgaaggtat aatgcaagac cgagcctcat ctcctccacg
1801 aagcctccct actccatcat agaacccaga gaatgtccct tcggtcattt cccctcagta
1861 tcatcattgg tgtcatcgca cttaggctga gttcctacat cccacagagg cagatggtca
1921 gacccaggag gaggcattgc cagctctcca ggctgtttgc tcaagcctag agatagagga
1981 gacagatcct ctctccttgg atatgggggt ctagctttgg ccccagcagc cactttgttt
2041 aacccagtat cctatagttt gtgatttgag atgatttttc attcattcaa catttattga
2101 gtgcctacta taaaagcagg ggctctcaca catattttct tacttaaacc tcctcacaac
2161 tctgaagtag atgtattatc cctggttcta tgaatgagaa cattggccca gagaggatga
2221 cccaggtctt gtagtggcag agcaagacgg taggctgagt gtcaagtaga aagtgggaga
2281 gcatcctcat gtctcaggtg attctagcca gactggcaaa gcagaacctt tcccgaggat
2341 gcctccgtcc tccccaaccc catgacccct catcttttct gtggcaatct tgcatctgtt
2401 caggacaaca tccctgctgc tctttaggaa gcaggaccct gtctaacata aattctgtac
2461 acaaaataag aggtccctca caggcaggca gccctccact ggtgactagg aagaattcag
2521 tcactgcctg ggctgtgtgg ttctgggcct tcctgtggag ctgagctgcc tgaattatca
2581 tgactctgaa cttggaagga tcattaagtg actgtagcct acactccatg cttccttcat
2641 attggaagaa aagtttctgg tagagagtcg gccgggtgca ctggctcaag cctgtaatcc
2701 cagcactttg ggaggctgtg gcaggtggat cacctgaggt caggagttca agaccagcct
2761 ggccaacaca gtgaaacccc atctctacta ataatacaaa aattagccag gtgtggtggc
2821 acatgcctgt agtcccagct actcgggagg ctgaggcatg agaatcgctg caacttgcaa
2881 ggtggaggtt acagtgagct gaaatcacgc cactgcactc cactccatct caaaaaaaaa
2941 aagagtctac attaaacaga ttccaaagta aagtttcttc atcccaatgc atggccatga
3001 tttacacaga cgtgcctagc atggctcatc aacatctgaa cggttgttcc ctaccatgcc
3061 tctgcaggca ttccacagag tcaggagatg ggttcacagg taaagattgg gggctttagt
3121 ggcttgtagg ggacaactgc tcagttgcag ggagagggag catttctaga aatagccaga
3181 ttttgctgcc caactagatc tgtcctcctg gttttagggg gcccttcttg atcccctctg
3241 agtgactgag ggaggttaca ttgtaaaata tgtccatgag ccaaacaggc ttatggaaag
3301 ttcttctaca cacaaaaaaa tcaaagctct cctctcccca tccccaacca ctgctagaaa
3361 attggccata atgaaactga cttgacaggt taaaagaccc tgtcctagat gcccaggaat
3421 caggtagtca cacattttat ggacttcatg gcagcgatga gtaatctgtg atgatactaa
3481 atagaagcaa taataactaa ctccattaaa tgtcacgctg attgtctgtt tttatagcaa
3541 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3601 aaaaaa
//