LOCUS BC030140 2490 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens PQ loop repeat containing 1, mRNA (cDNA clone
MGC:20614 IMAGE:4761671), complete cds.
ACCESSION BC030140
VERSION BC030140.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2490)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2490)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC030140.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: o Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222340.
FEATURES Location/Qualifiers
source 1..2490
/db_xref="H-InvDB:HIT000040958"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20614 IMAGE:4761671"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_47"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2490
/gene="PQLC1"
/gene_synonym="FLJ22378"
/db_xref="GeneID:80148"
/db_xref="HGNC:HGNC:26188"
CDS 137..952
/gene="PQLC1"
/gene_synonym="FLJ22378"
/codon_start=1
/product="PQ loop repeat containing 1"
/protein_id="AAH30140.1"
/db_xref="GeneID:80148"
/db_xref="HGNC:HGNC:26188"
/translation="MEAEGLDWLLVPLHQLVSWGAAAAMVFGGVVPYVPQYRDIRRTQ
NADGFSTYVCLVLLVANILRILFWFGRRFESPLLWQSAIMILTMLLMLKLCTEVRVAN
ELNARRRSFTAADSKDEEVKVAPRRSFLDFDPHHFWQWSSFSDYVQCVLAFTGVAGYI
TYLSIDSALFVETLGFLAVLTEAMLGVPQLYRNHRHQSTEGMSIKMVLMWTSGDAFKT
AYFLLKGAPLQFSVCGLLQVLVDLAILGQAYAFARHPQKPAPHAVHPTGTKAL"
BASE COUNT 418 a 749 c 817 g 506 t
ORIGIN
1 gggacgcggg gcgctgggcg cggggctggg ggcgcaggcc ccgaggccgc aggagcgcgc
61 ggagcggcga tgagcaggcg gccggtggcc cgcggggcgc ggagcccgtg acagcctcgg
121 ccaggcgggc gctgcgatgg aggccgaggg cctggactgg ctcctggtgc cactgcacca
181 gctggtgtcc tggggcgcgg ccgcggccat ggtcttcgga ggggtggtgc cctacgtccc
241 gcagtatcgg gacattcgca ggacgcagaa cgccgacggc ttctccacct acgtgtgcct
301 ggtgctgctg gtggccaaca ttttgcggat actcttctgg tttggaaggc gctttgagtc
361 cccgctgctg tggcagagcg ccatcatgat cctgaccatg ctgctgatgc tgaagctgtg
421 caccgaggtc cgtgtggcca acgagctcaa cgccaggcgc cgctccttta cagctgcaga
481 tagcaaggat gaagaagtca aggttgcccc caggcggtcc ttcctggact tcgaccccca
541 ccacttctgg cagtggagca gcttctcgga ctacgtgcag tgcgtcctgg ccttcacggg
601 cgtggcgggc tacatcacct acctgtccat tgactccgcc ctgtttgtgg agaccctggg
661 cttcctggct gtgctgaccg aagccatgct gggtgtgccc cagctttacc gcaaccaccg
721 ccaccagtcc acggagggca tgagcatcaa gatggtgctc atgtggacca gtggtgacgc
781 cttcaagacg gcctacttcc tgctgaaggg tgcccctctg cagttctccg tgtgcggcct
841 gctgcaggtg ctggtggacc tggccatcct ggggcaggcc tacgccttcg cccgccaccc
901 ccagaagccg gcgccccacg ccgtgcaccc cactggcacc aaggccctct gacagtgggg
961 aggacgagga tgtgggaccg ccagccgtgg gcactggtgg gccctgacct ccccgcgggg
1021 agggtgggtg ccgtggcccc tgcaggtgtg gcagagatgg ggcatgggca ttggggtctc
1081 catcagcctc tgtggggtgt ctcagggtgg gcagtggggg tggggctggg acgctgtttg
1141 tgctcagcgg ggacagccag ggttgatctg gccccgaggg ttttggatgt ttttaggatg
1201 acataaaaag caagtgtttt ccccatttcc tcttatgaaa caccgtctga gcccaaggta
1261 cacattgggc ggcctgcagg aacctgctcc aggtggacac acgggccagc agccgcgaac
1321 cttgaagctg gggtgaccgc aggagaccct gtaaggcctg tgagcggagc cctcgacccc
1381 gtgacaccct ggccagacac cctgcttgga ctggggtggc ctctgctacc caggggtctg
1441 gcacggggga gggctggggc tttctctgcc tggtacacac ggaaaggcgg ctgtgcggac
1501 gcagggtcac cgtgctccgg gttttctgac agttggtgtt tcctgggcct ttggagtggc
1561 tgcgaggcct gaacgccttg tggatccgct gtgtccagcc cggctgagca tcgccagggc
1621 tagctcatgc tgctcttgtc agcctctggt tctcctcgag tccttgggga cgtggcagat
1681 gccagcgacc atcagacaac gtggaggccc tcatgggcaa tggctgaggg ggccgggctg
1741 aggctgtgca catgcagtct gcacgccact cttgggctct gctggcggag atccccttcc
1801 ttctgggtgc agactgcacc tccggatgca gttttgatgt ccatcttcca ggagagagac
1861 ggtctcgggt ccagggagtg gagggggctg cccctgccgt gcaggtcctg gccgatggcg
1921 ccttaccctg ctgccctggg cttttggcct gaagcaaatt cctgagtggg gggtactggg
1981 gcctgccgca tcctgtcctg tccactgccc acccccgtgt gctggctccc tcacttctgg
2041 ctgcagtggg agccgccagt ctgacccttg tcaccgcacg ctctgccccc accccgttgc
2101 aagaggtcac accatgtcag cagccttgca ctgaccgcag ccggccccca ggcctcagag
2161 ttctggatgc ttccgtgcgg ctccaacagg catcgtcttc ccttccgcag gtggaggggc
2221 cgcttcccgc aggcatctga gctctgtgcc ggggccgtgg ccatgggaag atgttccacg
2281 ctgcctcctc ctcgagtttt cctcggaaac actcttgaat gtctgagtga gggtcctgct
2341 tagctctttg gcctgtgaga tgctttgaaa atttttattt ttttaagatg aagcaagatg
2401 tctgtagcgg taattgcctc acattaaact gtcgccgact gcaaaaaaaa aaaaaaaaaa
2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//