LOCUS BC030135 901 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SH3 domain binding glutamic acid-rich protein like 3,
mRNA (cDNA clone MGC:19619 IMAGE:4040656), complete cds.
ACCESSION BC030135
VERSION BC030135.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 901)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 901)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC030135.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: l Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42476331.
FEATURES Location/Qualifiers
source 1..901
/db_xref="H-InvDB:HIT000040955"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19619 IMAGE:4040656"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..901
/gene="SH3BGRL3"
/gene_synonym="SH3BP-1"
/gene_synonym="TIP-B1"
/db_xref="GeneID:83442"
/db_xref="HGNC:HGNC:15568"
CDS 204..485
/gene="SH3BGRL3"
/gene_synonym="SH3BP-1"
/gene_synonym="TIP-B1"
/codon_start=1
/product="SH3 domain binding glutamic acid-rich protein
like 3"
/protein_id="AAH30135.1"
/db_xref="GeneID:83442"
/db_xref="HGNC:HGNC:15568"
/translation="MSGLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDN
ALRDEMRALAGNPKATPPQIVNGDQYCGDYELFVEAVEQNTLQEFLKLA"
BASE COUNT 190 a 316 c 231 g 164 t
ORIGIN
1 gggaaggggc ctctggcgtg cggggcggtg tcgcgcaggt cccaccccgc ctgcccgcgc
61 cgcccattgg tcccgagcgc gatgacttgg cgggcggagc aggaaggaaa ccgctcccga
121 gcacggcggc ggcgtcgtct cccggcagtg cagctgccgc taccgccgcc ctctgcccgc
181 cggcccgtct gtctaccccc agcatgagcg gcctgcgcgt ctacagcacg tcggtcaccg
241 gctcccgcga aatcaagtcc cagcagagcg aggtgacccg aatcctggat gggaagcgca
301 tccaatacca gctagtggac atctcccagg acaacgccct gagggatgag atgcgagcct
361 tggcaggcaa ccccaaggcc accccacccc agattgtcaa cggggaccag tactgtgggg
421 actatgagct cttcgtggag gctgtggaac aaaacacgct gcaggagttc ctgaagctgg
481 cttgagtcaa gcctgtccag agttcccctg ctggactcca tcaccacact ccccccagcc
541 ttcacctggc catgaaggac cttttgacca actccctgtc attcctaacc taaccttaga
601 gtccctcccc caatgcaggc cacttctcct ccctcctctc taaatgtagt cccctctcct
661 ccatctaaag gcaacattcc ttacccatta gtctcagaaa ttgtcttaag caacagcccc
721 aaatgctggc tgccccccag ccaagcattg gggccgccat cctgcctggc actggctgat
781 gggcacctct gttggttcca tcagccagag ctctgccaaa ggccccgcag tccctctccc
841 aggaggaccc tagaggcaat taaatgatgt cctgttccat tggcaaaaaa aaaaaaaaaa
901 a
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