LOCUS BC030060 2158 bp mRNA linear HUM 24-JUN-2004
DEFINITION Homo sapiens F-box protein 27, mRNA (cDNA clone MGC:39298
IMAGE:5421414), complete cds.
ACCESSION BC030060
VERSION BC030060.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2158)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2158)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: n Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..2158
/db_xref="H-InvDB:HIT000040946"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39298 IMAGE:5421414"
/tissue_type="Pancreas, ductal carcinoma"
/clone_lib="NIH_MGC_110"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2158
/gene="FBXO27"
/gene_synonym="FBG5"
/db_xref="GeneID:126433"
CDS 50..901
/gene="FBXO27"
/gene_synonym="FBG5"
/codon_start=1
/product="FBXO27 protein"
/protein_id="AAH30060.1"
/db_xref="GeneID:126433"
/translation="MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPR
TLLGRCRQVCRGWRALVDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLG
RFCARRPIGRNLIRNPCGQEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSW
CCKKQVLDLEEEGLWPELLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDK
FSAVPDPIPQWNNNACLHVTHVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSV
IVRVRLS"
BASE COUNT 494 a 643 c 573 g 448 t
ORIGIN
1 gaggagcgcc gccaggcccc gggccacagc cgggcctggc ggggggacca tgggcgcctc
61 ggtctccagg ggccgggccg cccgggtccc cgcgccggag ccggaacccg aagaggcgct
121 ggacctgagc caactacccc cagagctgct tctggtggtg ctgagccacg tccccccgcg
181 cacgctgctc gggcgctgcc gccaagtgtg ccggggctgg cgagccctgg tggacggcca
241 ggccctgtgg ctgctgatcc tggcccgcga ccacggcgcc accggccgcg cgctgctgca
301 cctcgcccgc agctgccagt ctcccgcccg taacgccagg ccttgccccc tgggccgctt
361 ctgcgcgcgc agacccatcg gacgcaacct tattcgcaac ccctgcggcc aagaaggcct
421 ccgaaagtgg atggtgcaac acggtgggga cggctgggtg gtggaggaaa acaggacaac
481 cgtgcctggg gccccttctc agacgtgctt cgtgacttca ttcagctggt gttgcaagaa
541 gcaggtcttg gacctagagg aggagggtct gtggccagaa ctgctggata gtggcaggat
601 tgagatttgt gtctctgact ggtggggagc ccgacacgac agcggctgta tgtacagact
661 cctcgtccaa cttctagacg ccaaccagac tgttctagat aaattctctg ctgtgcctga
721 tcccatcccg cagtggaaca acaatgcctg ccttcacgtc acccacgtgt tctccaacat
781 caagatgggc gtccgctttg tgtctttcga acaccggggc caggacacac agttctgggc
841 tggccactat ggagcccgtg tgaccaactc cagtgtgatc gtgcgagtcc gtctgtccta
901 gtccagcact acccttcttg caagacagcc tgactgtgcc ttccagggcc tgggaccatt
961 ggctgggacc cctcattaac caaccaagca cttgtacctc cctggcatac tgggaattcc
1021 tgggtccaat caaaggccct gacgggccct gtcttcaggt tctagaaact accagaagaa
1081 gcttcttcca tcttatctac ctactgcagc tgctgctttg cgggggggcc ctactgtact
1141 gaggggaaac ccacaagtga gcatggggga atgcccatcc tggagaagaa ttcttgccct
1201 cccctctctt ctcctcccaa ccaaaaccct ccgatccagc cccaggcccc tctgtaccat
1261 cccctcccct ccgcaccact gacctcttgt ctcctattgt ttctgccaca gggacttcct
1321 tggtcccttc agggaagccc tcaactcatc tctgaactta gaatctcatc cttagggctc
1381 agagagtccc agccctaagg gtgtgaacct cacctcctgg ggcttccgag ctacagggct
1441 gggaccaggt catgcagctg aaagtctacg ttaaaaaaaa aaagtttggg ccaggcacag
1501 tggctcatgc ctgtggtccc agcactttgg gaggctgagg caggcggatc acctgaggtc
1561 aggagttcaa gaccagcctg gccaacatgg tgaaaccccg tctctactaa aaatccaaaa
1621 aattagccag gcttggtggt gtgcacctgt agttccagct actcgggagg ctgaggcagg
1681 agaattgctt gagcccggga ggcagaggct gcagtgaacc aagatcatgc cactgcactc
1741 cagcctgggc aacacagcga gactccgtct caaaaagaaa aagtttggat caggcagggt
1801 ggctcacacc tgtaatccct gcactttggg aggccaaggt gggaggatca gttgagcccc
1861 agagttcaag accagcctgg gcaatgtagt aagaccccca tcgctacaaa aaaaaaaaaa
1921 aagaatttgg agatggttct gcccactctg gtttctctga aaaaacgagg taattccctg
1981 agcccaaccc tgatcctcaa ggacctgtaa ttgtgtggta tttaaaatta aaataacatt
2041 atttttattt tgactttttt tcaaacagta agaataatat atcagcagca tgtatctgcc
2101 aatcatatgt aataaatttc ttattttgcc aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//