LOCUS BC029913 568 bp mRNA linear HUM 29-AUG-2008
DEFINITION Homo sapiens surfactant protein A1B, mRNA (cDNA clone
IMAGE:5175402), partial cds.
ACCESSION BC029913
VERSION BC029913.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 568)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 568)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC029913.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: l Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38888174.
FEATURES Location/Qualifiers
source 1..568
/db_xref="H-InvDB:HIT000091939_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5175402"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>568
/gene="SFTPA1B"
/gene_synonym="AC068139.6"
/gene_synonym="PSAP"
/gene_synonym="PSPA"
/gene_synonym="SFTP1"
/gene_synonym="SFTPA1"
/db_xref="GeneID:6435"
/db_xref="HGNC:HGNC:23439"
/db_xref="MIM:178630"
CDS 95..>568
/gene="SFTPA1B"
/gene_synonym="AC068139.6"
/gene_synonym="PSAP"
/gene_synonym="PSPA"
/gene_synonym="SFTP1"
/gene_synonym="SFTPA1"
/codon_start=1
/product="SFTPA1B protein"
/protein_id="AAH29913.1"
/db_xref="GeneID:6435"
/db_xref="HGNC:HGNC:23439"
/db_xref="MIM:178630"
/translation="MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGR
DGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAH
LDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARA"
BASE COUNT 129 a 151 c 178 g 110 t
ORIGIN
1 gtcgctgatt tcttggagcc tgaaaagaaa gtaacacagc agggatgagg acagatggtg
61 tgagtcagtg agagcagcga ctggacccag agccatgtgg ctgtgccctc tggccctcaa
121 cctcatcttg atggcagcct ctggtgctgt gtgcgaagtg aaggacgttt gtgttggaag
181 ccctggtatc cccggcactc ctggatccca cggcctgcca ggcagggacg ggagagatgg
241 tctcaaagga gaccctggcc ctccaggccc catgggtcca cctggagaaa tgccatgtcc
301 tcctggaaat gatgggctgc ctggagcccc tggtatccct ggagagtgtg gagagaaggg
361 ggagcctggc gagaggggcc ctccagggct tccagctcat ctagatgagg agctccaagc
421 cacactccac gactttagac atcaaatcct gcagacaagg ggagccctca gtctgcaggg
481 ctccataatg acagtaggag agaaggtctt ctccagcaat gggcagtcca tcacttttga
541 tgccattcag gaggcatgtg ccagagca
//