LOCUS BC029894 1077 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 158, mRNA (cDNA clone
MGC:35194 IMAGE:5171302), complete cds.
ACCESSION BC029894
VERSION BC029894.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1077)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1077)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: f Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22748654.
FEATURES Location/Qualifiers
source 1..1077
/db_xref="H-InvDB:HIT000040914"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35194 IMAGE:5171302"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1077
/gene="C1orf158"
/gene_synonym="MGC35194"
/gene_synonym="RP11-474O21.4"
/db_xref="GeneID:93190"
/db_xref="HGNC:HGNC:28567"
CDS 217..801
/gene="C1orf158"
/gene_synonym="MGC35194"
/gene_synonym="RP11-474O21.4"
/codon_start=1
/product="chromosome 1 open reading frame 158"
/protein_id="AAH29894.1"
/db_xref="GeneID:93190"
/db_xref="HGNC:HGNC:28567"
/translation="MFLTAVNPQPLSTPSWQIETKYSTKVLTGNWMEERRKFTRDTDK
TPQSIYRKEYIPFPDHRPDQISRWYGKRKVEGLPYKHLITHHQEPPHRYLISTYDDHY
NRHGYNPGLPPLRTWNGQKLLWLPEKSDFPLLAPPTNYGLYEQLKQRQLTPKAGLKQS
TYTSSYPRPPLCAMSWREHAVPVPPHRLHPLPHF"
BASE COUNT 345 a 310 c 212 g 210 t
ORIGIN
1 atccaagata gatcaactct ccctaaaggc tgacagtgaa ctcttggggc cgttttattc
61 tctgaggtta gcaaggagtc atctactagc cattcaggag gccagctggg aagacaaaat
121 aggcacccca aactcagcaa cttcataaca ccttcctctc cccgcctgaa gccttaaact
181 gcatcaagtc aaagaaacct ggggcaaatc cttaacatgt ttttgactgc agtaaatcca
241 cagccactct ctactccgag ctggcagatt gagaccaagt attcaacgaa agtgctcact
301 ggaaattgga tggaagagag gagaaagttc accagagaca ctgacaagac accccaatcc
361 atttacagaa aagaatacat ccccttccca gaccacagac cagaccagat ctccaggtgg
421 tatgggaaga ggaaagttga ggggctacct tacaaacacc tgatcaccca ccaccaggag
481 cccccacatc gctacctgat cagcacctat gacgaccatt acaaccggca tggttacaac
541 ccggggctgc ctccactccg cacttggaat ggacagaagt tgctgtggct gccagagaag
601 tctgactttc cccttcttgc tccccctaca aactatggac tctatgagca gctcaagcag
661 agacagctca cacccaaggc tggcctgaag cagagcactt atacttcatc ctaccccaga
721 ccaccgttgt gcgctatgtc ctggagggag catgcggtcc cggtccctcc ccatcgcctg
781 catcctctcc cacacttctg agagctgcca ccccaggagc agctcagata gaatcagctg
841 gagaccacag catcactgga cttgccagac aacaagtggc gcagataaac tcagagtacg
901 agatctggcc cgtcaaaggt gctctcagaa tcatcatctg catttggcgg tacctgtccc
961 ccctcaaaac ccacaggttc ctttcttttc catccaacaa ttaaagatct ttgacactaa
1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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