LOCUS BC029882 669 bp mRNA linear HUM 19-OCT-2006
DEFINITION Homo sapiens CART prepropeptide, mRNA (cDNA clone MGC:34499
IMAGE:5171665), complete cds.
ACCESSION BC029882
VERSION BC029882.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 669)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 669)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: f Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46852394.
FEATURES Location/Qualifiers
source 1..669
/db_xref="H-InvDB:HIT000040908_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34499 IMAGE:5171665"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..669
/gene="CARTPT"
/gene_synonym="CART"
/db_xref="GeneID:9607"
/db_xref="HGNC:HGNC:24323"
/db_xref="MIM:602606"
CDS 128..478
/gene="CARTPT"
/gene_synonym="CART"
/codon_start=1
/product="CART prepropeptide"
/protein_id="AAH29882.1"
/db_xref="GeneID:9607"
/db_xref="HGNC:HGNC:24323"
/db_xref="MIM:602606"
/translation="MESSRVRLLPLLGAALLLMLPLLGTRAQEDAELQPRALDIYSAV
DDASHEKELIEALQEVLKKLKSKRVPIYEKKYGQVPMCDAGEQCAVRKGARIGKLCDC
PRGTSCNSFLLKCL"
BASE COUNT 164 a 194 c 167 g 144 t
ORIGIN
1 ggttgacccg ggccctcctc cacaccccct tccttcttcg cctcctccct ctttcctgca
61 cgggggctcg ggctcactat aaaaggtggg agcgcgtggt gccccagcaa cgacgagttt
121 cagaacgatg gagagctccc gcgtgaggct gctgcccctc ctgggcgccg ccctgctgct
181 gatgctacct ctgttgggta cccgtgccca ggaggacgcc gagctccagc cccgagccct
241 ggacatctac tctgccgtgg atgatgcctc ccacgagaag gagctgatcg aagcgctgca
301 agaagtcttg aagaagctca agagtaaacg tgttcccatc tatgagaaga agtatggcca
361 agtccccatg tgtgacgccg gtgagcagtg tgcagtgagg aaaggggcaa ggatcgggaa
421 gctgtgtgac tgtccccgag gaacctcctg caattccttc ctcctgaagt gcttatgaag
481 gggcgtccat tctcctccat acatccccat ccctctactt tccccagagg accacacctt
541 cctccctgga gtttggctta agcaacagat aaagttttta ttttcctctg aagggaaagg
601 gctcttttcc tgctgtttca aaaataaaag aacacattag aaaaaaaaaa aaaaaaaaaa
661 aaaaaaaaa
//