LOCUS BC029822 2718 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens platelet-derived growth factor beta polypeptide
(simian sarcoma viral (v-sis) oncogene homolog), mRNA (cDNA clone
MGC:34575 IMAGE:5174750), complete cds.
ACCESSION BC029822
VERSION BC029822.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2718)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2718)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: k Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4505680.
FEATURES Location/Qualifiers
source 1..2718
/db_xref="H-InvDB:HIT000040889"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34575 IMAGE:5174750"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2718
/gene="PDGFB"
/gene_synonym="c-sis"
/gene_synonym="PDGF2"
/gene_synonym="SSV"
/db_xref="GeneID:5155"
/db_xref="HGNC:HGNC:8800"
/db_xref="MIM:190040"
CDS 313..1038
/gene="PDGFB"
/gene_synonym="c-sis"
/gene_synonym="PDGF2"
/gene_synonym="SSV"
/codon_start=1
/product="platelet-derived growth factor beta polypeptide
(simian sarcoma viral (v-sis) oncogene homolog)"
/protein_id="AAH29822.1"
/db_xref="GeneID:5155"
/db_xref="HGNC:HGNC:8800"
/db_xref="MIM:190040"
/translation="MNRCWALFLSLCCYLRLVSAEGDPIPEELYEMLSDHSIRSFDDL
QRLLHGDPGEEDGAELDLNMTRSHSGGELESLARGRRSLGSLTIAEPAMIAECKTRTE
VFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLRPVQVRKIEIVR
KKPIFKKATVTLEDHLACKCETVAAARPVTRSPGGSQEQRAKTPQTRVTIRTVRVRRP
PKGKHRKFKHTHDKTALKETLGA"
BASE COUNT 547 a 846 c 758 g 567 t
ORIGIN
1 gacgcctcgg ctggttcgcg acgcagcccc ccggccgtgg atgctcactc gggctcggga
61 tccgcccagg tagcggcctc ggacccaggt cctgcgccca ggtcctcccc tgccccccag
121 cgacggagcc ggggccgggg gcggcggcgc ccgggggcca tgcgggtgag ccgcggctgc
181 agaggcctga gcgcctgatc gccgcggacc cgagccgagc ccacccccct ccccagcccc
241 ccaccctggc cgcgggggcg gcgcgctcga tctacgcgtc cggggccccg cggggccggg
301 cccggagtcg gcatgaatcg ctgctgggcg ctcttcctgt ctctctgctg ctacctgcgt
361 ctggtcagcg ccgaggggga ccccattccc gaggagcttt atgagatgct gagtgaccac
421 tcgatccgct cctttgatga tctccaacgc ctgctgcacg gagaccccgg agaggaagat
481 ggggccgagt tggacctgaa catgacccgc tcccactctg gaggcgagct ggagagcttg
541 gctcgtggaa gaaggagcct gggttccctg accattgctg agccggccat gatcgccgag
601 tgcaagacgc gcaccgaggt gttcgagatc tcccggcgcc tcatagaccg caccaacgcc
661 aacttcctgg tgtggccgcc ctgtgtggag gtgcagcgct gctccggctg ctgcaacaac
721 cgcaacgtgc agtgccgccc cacccaggtg cagctgcgac ctgtccaggt gagaaagatc
781 gagattgtgc ggaagaagcc aatctttaag aaggccacgg tgacgctgga agaccacctg
841 gcatgcaagt gtgagacagt ggcagctgca cggcctgtga cccgaagccc ggggggttcc
901 caggagcagc gagccaaaac gccccaaact cgggtgacca ttcggacggt gcgagtccgc
961 cggcccccca agggcaagca ccggaaattc aagcacacgc atgacaagac ggcactgaag
1021 gagacccttg gagcctaggg gcatcggcag gagagtgtgt gggcagggtt atttaatatg
1081 gtatttgctg tattgccccc atggggtcct tggagtgata atattgtttc cctcgtccgt
1141 ctgtctcgat gcctgattcg gacggccaat ggtgcttccc ccacccctcc acgtgtccgt
1201 ccacccttcc atcagcgggt ctcctcccag cggcctccgg cgtcttgccc agcagctcaa
1261 gaagaaaaag aaggactgaa ctccatcgcc atcttcttcc cttaactcca agaacttggg
1321 ataagagtgt gagagagact gatggggtcg ctctttgggg gaaacgggct ccttcccctg
1381 cacctggcct gggccacacc tgagcgctgt ggactgtcct gaggagccct gaggacctct
1441 cagcatagcc tgcctgatcc ctgaacccct ggccagctct gaggggaggc acctccaggc
1501 aggccaggct gcctcggact ccatggctaa gaccacagac gggcacacag actggagaaa
1561 acccctccca cggtgcccaa acaccagtca cctcgtctcc ctggtgcctc tgtgcacagt
1621 ggcttctttt cgttttcgtt ttgaagacgt ggactcctct tggtgggtgt ggccagcaca
1681 ccaagtggct gggtgccctc tcaggtgggt tagagatgga gtttgctgtt gaggtggctg
1741 tagatggtga cctgggtatc ccctgcctcc tgccacccct tcctccccac actccactct
1801 gattcacctc ttcctctggt tcctttcatc tctctacctc caccctgcat tttcctcttg
1861 tcctggccct tcagtctgct ccaccaaggg gctcttgaac cccttattaa ggccccagat
1921 gatcccagtc actcctctct agggcagaag actagaggcc agggcagcaa gggacctgct
1981 catcatattc caacccagcc acgactgcca tgtaaggttg tgcagggtgt gtactgcaca
2041 aggacattgt atgcagggag cactgttcac atcatagata aagctgattt gtatatttat
2101 tatgacaatt tctggcagat gtaggtaaag aggaaaagga tccttttcct aattcacaca
2161 aagactcctt gtggactggc tgtgcccctg atgcagcctg tggcttggag tggccaaata
2221 ggagggagac tgtggtaggg gcagggaggc aacactgctg tccacatgac ctccatttcc
2281 caaagtcctc tgctccagca actgcccttc caggtgggtg tgggacacct gggagaaggt
2341 ctccaaggga gggtgcagcc ctcttgcccg cacccctccc tgcttgcaca cttccccatc
2401 tttgatcctt ctgagctcca cctctggtgg ctcctcctag gaaaccagct cgtgggctgg
2461 gaatggggga gagaagggaa aagatcccca agaccccctg gggtgggatc tgagctccca
2521 cctcccttcc cacctactgc actttccccc ttcccgcctt ccaaaacctg cttccttcag
2581 tttgtaaagt cggtgattat atttttgggg gctttccttt tattttttaa atgtaaaatt
2641 tatttatatt ccgtatttaa agttgtaaaa aaaaataacc acaaaacaaa accaaaaaaa
2701 aaaaaaaaaa aaaaaaaa
//