LOCUS BC029822 2718 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog), mRNA (cDNA clone MGC:34575 IMAGE:5174750), complete cds. ACCESSION BC029822 VERSION BC029822.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2718) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2718) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 51 Row: k Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4505680. FEATURES Location/Qualifiers source 1..2718 /db_xref="H-InvDB:HIT000040889" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34575 IMAGE:5174750" /tissue_type="Brain, Lung, Testis, adult, pooled whole" /clone_lib="NIH_MGC_115" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2718 /gene="PDGFB" /gene_synonym="c-sis" /gene_synonym="PDGF2" /gene_synonym="SSV" /db_xref="GeneID:5155" /db_xref="HGNC:HGNC:8800" /db_xref="MIM:190040" CDS 313..1038 /gene="PDGFB" /gene_synonym="c-sis" /gene_synonym="PDGF2" /gene_synonym="SSV" /codon_start=1 /product="platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog)" /protein_id="AAH29822.1" /db_xref="GeneID:5155" /db_xref="HGNC:HGNC:8800" /db_xref="MIM:190040" /translation="MNRCWALFLSLCCYLRLVSAEGDPIPEELYEMLSDHSIRSFDDL QRLLHGDPGEEDGAELDLNMTRSHSGGELESLARGRRSLGSLTIAEPAMIAECKTRTE VFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLRPVQVRKIEIVR KKPIFKKATVTLEDHLACKCETVAAARPVTRSPGGSQEQRAKTPQTRVTIRTVRVRRP PKGKHRKFKHTHDKTALKETLGA" BASE COUNT 547 a 846 c 758 g 567 t ORIGIN 1 gacgcctcgg ctggttcgcg acgcagcccc ccggccgtgg atgctcactc gggctcggga 61 tccgcccagg tagcggcctc ggacccaggt cctgcgccca ggtcctcccc tgccccccag 121 cgacggagcc ggggccgggg gcggcggcgc ccgggggcca tgcgggtgag ccgcggctgc 181 agaggcctga gcgcctgatc gccgcggacc cgagccgagc ccacccccct ccccagcccc 241 ccaccctggc cgcgggggcg gcgcgctcga tctacgcgtc cggggccccg cggggccggg 301 cccggagtcg gcatgaatcg ctgctgggcg ctcttcctgt ctctctgctg ctacctgcgt 361 ctggtcagcg ccgaggggga ccccattccc gaggagcttt atgagatgct gagtgaccac 421 tcgatccgct cctttgatga tctccaacgc ctgctgcacg gagaccccgg agaggaagat 481 ggggccgagt tggacctgaa catgacccgc tcccactctg gaggcgagct ggagagcttg 541 gctcgtggaa gaaggagcct gggttccctg accattgctg agccggccat gatcgccgag 601 tgcaagacgc gcaccgaggt gttcgagatc tcccggcgcc tcatagaccg caccaacgcc 661 aacttcctgg tgtggccgcc ctgtgtggag gtgcagcgct gctccggctg ctgcaacaac 721 cgcaacgtgc agtgccgccc cacccaggtg cagctgcgac ctgtccaggt gagaaagatc 781 gagattgtgc ggaagaagcc aatctttaag aaggccacgg tgacgctgga agaccacctg 841 gcatgcaagt gtgagacagt ggcagctgca cggcctgtga cccgaagccc ggggggttcc 901 caggagcagc gagccaaaac gccccaaact cgggtgacca ttcggacggt gcgagtccgc 961 cggcccccca agggcaagca ccggaaattc aagcacacgc atgacaagac ggcactgaag 1021 gagacccttg gagcctaggg gcatcggcag gagagtgtgt gggcagggtt atttaatatg 1081 gtatttgctg tattgccccc atggggtcct tggagtgata atattgtttc cctcgtccgt 1141 ctgtctcgat gcctgattcg gacggccaat ggtgcttccc ccacccctcc acgtgtccgt 1201 ccacccttcc atcagcgggt ctcctcccag cggcctccgg cgtcttgccc agcagctcaa 1261 gaagaaaaag aaggactgaa ctccatcgcc atcttcttcc cttaactcca agaacttggg 1321 ataagagtgt gagagagact gatggggtcg ctctttgggg gaaacgggct ccttcccctg 1381 cacctggcct gggccacacc tgagcgctgt ggactgtcct gaggagccct gaggacctct 1441 cagcatagcc tgcctgatcc ctgaacccct ggccagctct gaggggaggc acctccaggc 1501 aggccaggct gcctcggact ccatggctaa gaccacagac gggcacacag actggagaaa 1561 acccctccca cggtgcccaa acaccagtca cctcgtctcc ctggtgcctc tgtgcacagt 1621 ggcttctttt cgttttcgtt ttgaagacgt ggactcctct tggtgggtgt ggccagcaca 1681 ccaagtggct gggtgccctc tcaggtgggt tagagatgga gtttgctgtt gaggtggctg 1741 tagatggtga cctgggtatc ccctgcctcc tgccacccct tcctccccac actccactct 1801 gattcacctc ttcctctggt tcctttcatc tctctacctc caccctgcat tttcctcttg 1861 tcctggccct tcagtctgct ccaccaaggg gctcttgaac cccttattaa ggccccagat 1921 gatcccagtc actcctctct agggcagaag actagaggcc agggcagcaa gggacctgct 1981 catcatattc caacccagcc acgactgcca tgtaaggttg tgcagggtgt gtactgcaca 2041 aggacattgt atgcagggag cactgttcac atcatagata aagctgattt gtatatttat 2101 tatgacaatt tctggcagat gtaggtaaag aggaaaagga tccttttcct aattcacaca 2161 aagactcctt gtggactggc tgtgcccctg atgcagcctg tggcttggag tggccaaata 2221 ggagggagac tgtggtaggg gcagggaggc aacactgctg tccacatgac ctccatttcc 2281 caaagtcctc tgctccagca actgcccttc caggtgggtg tgggacacct gggagaaggt 2341 ctccaaggga gggtgcagcc ctcttgcccg cacccctccc tgcttgcaca cttccccatc 2401 tttgatcctt ctgagctcca cctctggtgg ctcctcctag gaaaccagct cgtgggctgg 2461 gaatggggga gagaagggaa aagatcccca agaccccctg gggtgggatc tgagctccca 2521 cctcccttcc cacctactgc actttccccc ttcccgcctt ccaaaacctg cttccttcag 2581 tttgtaaagt cggtgattat atttttgggg gctttccttt tattttttaa atgtaaaatt 2641 tatttatatt ccgtatttaa agttgtaaaa aaaaataacc acaaaacaaa accaaaaaaa 2701 aaaaaaaaaa aaaaaaaa //