LOCUS BC029778 2040 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens forkhead box I1, mRNA (cDNA clone MGC:34197
IMAGE:5185923), complete cds.
ACCESSION BC029778
VERSION BC029778.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2040)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2040)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: f Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21618326.
FEATURES Location/Qualifiers
source 1..2040
/db_xref="H-InvDB:HIT000040869"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34197 IMAGE:5185923"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2040
/gene="FOXI1"
/gene_synonym="FREAC6"
/gene_synonym="HFH3"
/db_xref="GeneID:2299"
/db_xref="HGNC:HGNC:3815"
/db_xref="MIM:601093"
CDS 46..897
/gene="FOXI1"
/gene_synonym="FREAC6"
/gene_synonym="HFH3"
/codon_start=1
/product="forkhead box I1"
/protein_id="AAH29778.2"
/db_xref="GeneID:2299"
/db_xref="HGNC:HGNC:3815"
/db_xref="MIM:601093"
/translation="MSSFDLPAPSPPRCSPQFPSIGQEPPEMNLYYENFFHPQGVPSP
QRPSFEGGGEYGATPNPYLWFNGPTMTPPPYLPGPNASPFLPQAYGVQRPLLPSVSGL
GGSDLGWLPIPSQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFY
NKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPAYVSGGSPTSHPLVTPGLSPEPSDKTG
QNSLTFNSFSPLTNLSNHSGGGDWANPMPTNMLSYGGSVLSQFSPHFYNSVNTSGVLY
PREGTEV"
BASE COUNT 498 a 627 c 509 g 406 t
ORIGIN
1 gggtgcaggt gccaggcagg tggctccggc cagcccagcc ccagcatgag ctccttcgac
61 ctgccggcgc cctccccacc tcgctgcagc ccccagttcc ccagcatcgg ccaggagccc
121 cccgagatga acctctacta tgagaacttc ttccacccac agggcgtgcc cagccctcag
181 cggccctcct tcgagggggg cggcgagtat ggggccaccc ccaaccccta cctctggttc
241 aacgggccca ccatgacccc gccaccctac ctgcccggcc ccaacgccag ccccttcctg
301 ccccaggcct atggagtgca gaggccgctg ctgcccagcg tgtcggggct tggggggagc
361 gacctgggct ggctgcccat cccctcgcag gaggagctga tgaagctggt gcggccaccc
421 tattcctact cggctctcat cgccatggcc atccacgggg cacccgacaa gcgcctcact
481 ctcagccaga tctaccagta cgtggccgac aacttcccct tctacaacaa gagcaaggcc
541 ggctggcaga actccatccg ccacaacctg tcgctcaacg actgcttcaa gaaggtgccc
601 cgcgacgagg acgacccggc ctatgtgagc ggggggagcc ccacgagcca ccccttggtc
661 acaccaggac tgagccctga gcccagtgac aagacggggc agaactcact gaccttcaac
721 tccttctccc cgctcaccaa cctcagcaac cacagcggtg ggggtgactg ggcgaacccc
781 atgcccacca acatgctcag ctacggagga tctgtgctca gccaattcag ccctcacttc
841 tacaacagtg tcaacaccag tggtgtcctc taccccaggg agggcaccga ggtctaggta
901 cagaacagct cctgagccag gtggacatgc cagagagaaa agcagtagag gtcctccatg
961 ccagccccac ggtggtccat gactgcggaa ctgcccagac ataagcagga gcctccgagg
1021 aatccaccct ctttctagaa cactggttaa ggcttctgtt tatcacacat aggcccacac
1081 acagactcac caactttgca atagaaatac tggtgcctgc agagcagcac taacagtggc
1141 aggtgctgta ctaggctctg tactggccac acttactatt gacagtcacc ccgtaaggtt
1201 cacaaaccac cccattgaac agatgaggaa ctgaggctca aggaggttaa gtaacatttc
1261 cagggttata taaactagta aatggcagag ctaagagtca aatccaggtc tatgtgatcc
1321 tcagagattg gaggccagga tggagaattg gttgagtagc caaggaaggt cagtgtgaaa
1381 agcttgctat ggcaaatata gcgaaatctc tccactgcct tctgtccacc agcatttagt
1441 gccagcctag gcacaacttg tcctggtcca agtccttatt ctgcttgccc caacttacct
1501 gcagacactc cttttgctac cactcaagga aggaagtcac cagtggcctt agtgcaggaa
1561 actcagccct ggtggccctg cagaacaatg catctgacat gtgcgatgca tccccatgga
1621 gagacagcat tgctccccag ccctccagaa accttgagca gatccaggga tcagtgagag
1681 gagtggtgtg tacccctaaa tcctcccacc ccagcactgc ccatctgtaa aatcttgtaa
1741 agcccagttt cctgtgtgca tgtcatggac cagtgagctg gagatggctg aatcttccaa
1801 gagaaacaag gttggataag cgcttccttt tttttagccc aggagaggtg gatgtttgtc
1861 tgagaaaaca atggcctcaa gggaggggcc ttgggcccac cctcacaggg ggtctctgtg
1921 tgatctcttg ggatttctcc ttgtttttgt gagtacctgg gaagtgttgt ttgttttctt
1981 attttctttt taattaaaaa acaaacaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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