LOCUS BC029755 1478 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens synaptogyrin 2, mRNA (cDNA clone MGC:21859 IMAGE:4341106), complete cds. ACCESSION BC029755 VERSION BC029755.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1478) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1478) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 26 Row: i Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..1478 /db_xref="H-InvDB:HIT000040865" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:21859 IMAGE:4341106" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1478 /gene="SYNGR2" /db_xref="GeneID:9144" /db_xref="HGNC:HGNC:11499" /db_xref="MIM:603926" CDS 6..680 /gene="SYNGR2" /codon_start=1 /product="synaptogyrin 2" /protein_id="AAH29755.1" /db_xref="GeneID:9144" /db_xref="HGNC:HGNC:11499" /db_xref="MIM:603926" /translation="MESGAYGAAKAGGSFDLRRFLTQPQVVARAVCLVFALIVFSCIY GEGYSNAHESKQMYCVFNRNEDACRYGSAIGVLAFLASAFFLVVDAYFPQISNATDRK YLVIGDLLFSALWTFLWFVGFCFLTNQWAVTNPKDVLVGADSVRAAITFSFFSIFSWG VLASLAYQRYKAGVDDFIQNYVDPTPDPNTAYASYPGASVDNYQQPPFTQNAETTEGY QPPPVY" BASE COUNT 254 a 469 c 420 g 335 t ORIGIN 1 gcgacatgga gagcggggcc tacggcgcgg ccaaggcggg cggctccttc gacctgcggc 61 gcttcctgac gcagccgcag gtggtggcgc gcgccgtgtg cttggtcttc gccttgatcg 121 tgttctcctg catctatggt gagggctaca gcaatgccca cgagtctaag cagatgtact 181 gcgtgttcaa ccgcaacgag gatgcctgcc gctatggcag tgccatcggg gtgctggcct 241 tcctggcctc ggccttcttc ttggtggtcg acgcgtattt cccccagatc agcaacgcca 301 ctgaccgcaa gtacctggtc attggtgacc tgctcttctc agctctctgg accttcctgt 361 ggtttgttgg tttctgcttc ctcaccaacc agtgggcagt caccaacccg aaggacgtgc 421 tggtgggggc cgactctgtg agggcagcca tcaccttcag cttcttttcc atcttctcct 481 ggggtgtgct ggcctccctg gcctaccagc gctacaaggc tggcgtggac gacttcatcc 541 agaattacgt tgaccccact ccggacccca acactgccta cgcctcctac ccaggtgcat 601 ctgtggacaa ctaccaacag ccacccttca cccagaacgc ggagaccacc gagggctacc 661 agccgccccc tgtgtactga gcggcggtta gcgtgggaag ggggacagag agggccctcc 721 cctctgccct ggactttccc atgagcctcc tggaactgcc agcccctctc tttcacctgt 781 tccatcctgt gcagctgaca cacagctaag gagcctcata gcctggcggg ggctggcaga 841 gccacacccc aagtgcctgt gcccagaggg cttcagtcag ccgctcactc ctccagggca 901 cttttaggaa agggttttta gctagtgttt ttcctcgctt ttaatgacct cagccccgcc 961 tgcagtggct agaagccagc aggtgcccat gtgctactga caagtgcctc agcttccccc 1021 cggcccgggt caggccgtgg gagccgctat tatctgcgtt ctctgccaaa gactcgtggg 1081 ggccatcaca cctgccctgt gcagcggagc cggaccaggc tcttgtgtcc tcactcaggt 1141 ttgcttcccc tgtgcccact gctgtatgat ctgggggcca ccaccctgtg ccggtggcct 1201 ctgggctgcc tcccgtggtg tgagggcggg gctggtgctc atggcacttc ctccttgctc 1261 ccacccctgg cagcagggaa gggctttgcc tgacaacacc cagctttatg taaatattct 1321 gcagttgtta cttaggaagc ctggggaggg caggggtgcc ccatggctcc cagactctgt 1381 ctgtgccgag tgtattataa aatcgtgggg gagatgcccg gcctgggatg ctgtttggag 1441 acggaataaa tgttttctca ttcaaaaaaa aaaaaaaa //