LOCUS BC029735 1635 bp mRNA linear SYN 02-SEP-2016
DEFINITION Synthetic construct Homo sapiens LIM and calponin homology domains
1, mRNA (cDNA clone IMAGE:3857528), partial cds.
ACCESSION BC029735
VERSION BC029735.1
KEYWORDS .
SOURCE synthetic construct
ORGANISM synthetic construct
other sequences; artificial sequences.
REFERENCE 1 (bases 1 to 1635)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1635)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: b Column: 12.
FEATURES Location/Qualifiers
source 1..1635
/db_xref="H-InvDB:HIT000091891"
/organism="synthetic construct"
/mol_type="mRNA"
/isolation_source="Homo sapiens; Ovary, adenocarcinoma"
/db_xref="taxon:32630"
/clone="IMAGE:3857528"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1635
/gene="LIMCH1"
/gene_synonym="LIMCH1A"
/gene_synonym="LMO7B"
/db_xref="GeneID:22998"
/db_xref="HGNC:HGNC:29191"
CDS <1..982
/gene="LIMCH1"
/gene_synonym="LIMCH1A"
/gene_synonym="LMO7B"
/codon_start=2
/transl_table=11
/product="LIMCH1 protein"
/protein_id="AAH29735.1"
/db_xref="GeneID:22998"
/db_xref="HGNC:HGNC:29191"
/translation="DKMPEANQLHLPNLNSQVDSPSSEKSPVMTPFKFWAWDPEEERR
RQEKWQQEQERLLQERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFT
VSSSSADQLSTSSSMTEGSGTMNKIDLGNCQDEKQDRRWKKSFQGDDSDLLLKTRESD
RLEEKGSLTEGALAHSGNPVSKGVHEDHQLDTEAGAPHCGTNPQLAQDPSQNQQTSNP
THSSEDVKPKTLPLDKSINHQIESPSERRKSISGKKLCSSCGLPLGKGAAMIIETLNL
YFHIQCFRCGICKGQLGDAVSGTDVRIRNGLLNCNDCYMRSRSAGQPTTL"
BASE COUNT 501 a 322 c 383 g 429 t
ORIGIN
1 ggacaaaatg cctgaagcca accaactaca tttgccaaat ctcaattctc aagtggattc
61 tccaagcagt gagaagtcac ctgttatgac accttttaag ttctgggcat gggacccaga
121 agaggagcgc aggcgacagg aaaaatggca acaggaacag gaacgtttgc tccaggagag
181 ataccagaag gagcaggaca agctgaaaga agagtgggaa aaggcccaaa aggaggtgga
241 agaggaagaa cgcagatact atgaggagga gcgtaagata attgaagaca ctgtggttcc
301 atttactgtt tcttcaagtt ccgctgacca gctgtctacc tcttcctcca tgactgaagg
361 cagtgggaca atgaataaga tagacctggg aaactgtcaa gatgaaaaac aagacagaag
421 atggaagaaa tcattccagg gagatgacag tgacttattg ctgaagacta gggaaagtga
481 tcgactggag gagaagggca gcctaactga aggggccttg gctcattctg ggaaccctgt
541 atcaaaagga gtccatgaag accatcagct ggataccgag gctggggccc cacactgtgg
601 aacaaaccca cagcttgctc aggatccatc ccagaatcag cagacatcaa atccaacgca
661 cagttcagaa gatgtgaagc caaaaaccct cccgctggat aaaagcatta accatcagat
721 cgagtctccc agtgaaaggc ggaagtctat aagtggaaag aagctgtgct cttcctgtgg
781 gcttcctttg ggtaaaggag ctgcaatgat catcgagacc ctcaatctct attttcacat
841 ccagtgtttc aggtgtggaa tttgtaaagg ccagcttgga gatgcagtga gtgggacgga
901 tgttaggatt cgaaatggtc tcctgaactg taatgattgc tacatgcgat ccagaagtgc
961 cgggcagcct acaacattgt gacacggctt tcaagcttcc ggatcactca ccatttcttt
1021 actgagagtg tcccctggca actgcttaac aaaatcccaa gctcaggggc ttctcagcat
1081 ttacctaatt tctgaaaggc tcttctgaaa ggtggtatct gttctttcgt agcacagtgt
1141 ttatgttttt cctgtttatt gttttggttt tttttttttt ttgcatttgc acagtataca
1201 caaaagaata tggggttgta atgatcctga atagctcaaa aaaggtttta gcatggtcaa
1261 acaggcttat ggtttaaaat gtgttattct cttctttggg aattagctaa atgatgcaat
1321 aaacctgttt tgttttagaa tgtctaggaa ttaaacactt tatgtttaca gaattgagct
1381 gcagaaagtg caagacatgc caatttgaga cacacggtct tctaagactg aaggataaat
1441 ttaatgcatt tcagaaacta aacatcacag caagctctat ctctgagcta taatttgttt
1501 ttaatgcaaa gacactagtt tgataatata tactgtaatc ctgaaacatt tgtgttactt
1561 acctttggag gtagaaatta taccaataaa ttattgcacc gttagtatta aaagttctag
1621 atcgcgagcg gccgc
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