LOCUS BC029634 1321 bp mRNA linear HUM 15-SEP-2004
DEFINITION Homo sapiens Rho GTPase activating protein 27, mRNA (cDNA clone
IMAGE:4748060), partial cds.
ACCESSION BC029634
VERSION BC029634.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1321)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1321)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: j Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1321
/db_xref="H-InvDB:HIT000091876_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4748060"
/tissue_type="Skin, squamous cell carcinoma"
/clone_lib="NCI_CGAP_Skn4"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene <1..1321
/gene="ARHGAP27"
/gene_synonym="CAMGAP1"
/gene_synonym="FLJ43547"
/db_xref="GeneID:201176"
CDS <1..239
/gene="ARHGAP27"
/gene_synonym="CAMGAP1"
/gene_synonym="FLJ43547"
/codon_start=3
/product="ARHGAP27 protein"
/protein_id="AAH29634.1"
/db_xref="GeneID:201176"
/translation="FFSVASRLLCVCDSVCGGESLFSGMVGAGRRSLMEGFLAASGPH
LVEAFTETLWALALCWHCASHEAALITSPLWKQD"
BASE COUNT 290 a 370 c 350 g 311 t
ORIGIN
1 gttttttctc tgttgcatcg cgcctactgt gcgtgtgcga tagcgtgtgt gggggtgaga
61 gtttgttttc tggaatggta ggtgctggga ggaggagttt gatggagggc ttcctggctg
121 cttctggccc tcacctcgtg gaggccttca cagagaccct gtgggccctg gccctgtgct
181 ggcactgtgc cagtcatgag gcagctctga tcacttcccc actgtggaaa caggactgac
241 ccagccttca gcgtgggctg ctgaagctat cctcctcagg cctcagggat gacctcctgc
301 ctgagcctct cacaggctgg ctgtgggcca gtttcatctg ctttcctgtt gggggtcccg
361 ggcctctgct gtccttgacc cactggtgtt ctgtgcaagg cttcttccca ttcaccaagt
421 gcacaccttg catctgccgc tcggcatgca ccagttccac acaccatccc attttacaga
481 caaggacgct gaggcctgca gcagcagtgt gacttgctca aggtccagtg agtgacctca
541 ttccccagaa aaggctcctc ccacaccaga gtacagcctg ggtaggggga aaatcagttc
601 tttcagctac cacccatcca acctttgggc ctatgtgaaa agaaaggaac taagctgggt
661 gtgttctgtc tggacctggg gaggcccctg aaggcaaaga gggaaactgt cccagctgtt
721 ctgtcctagg ggagggggac atagccctag caggagctcc cagcccctct tggcactctg
781 acacacaagt acacccatct ggggcccgct ttgccacgaa gagctgggca ggcctgcagg
841 gtgtggggaa ggaggacaca acctcaagaa aggaagcgtg aaccccaggg aacagcgggt
901 cccttccctc ctcagacaca agccacctca gcttgtggct cttggccccc agccccacca
961 acccacctgt tcatttattc aacagacaat gacagctgat atttattgga catttgcacc
1021 atgccaagca ttcggcttgg attatcccat ttgtttctca cagccggtat ttattgtctg
1081 ctcctctgtg ctaggtgctg tgctctgggc aggggcactg catgggctgc ctgccctggt
1141 ggagcttgtg gtctgatggg tgaggctgac ccaagcccac cccattgcca acagggccag
1201 ggcaagagta cacacagggg cctcatacca tatgtctaaa tatttaaaag ttatcaatca
1261 agttaacaac tgttaaataa aatatgttct attctcctaa aaaaaaaaaa aaaaaaaaaa
1321 a
//